RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RNLSQ5VYX0 342 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 C11orf53Q8IXP5 236 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 STX19Q8N4C7 294 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 PP6455Q8WZ26 134 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 RNF170Q96K19 258 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 CHST5Q9GZS9 411 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 FGF23Q9GZV9 251 aaPredicted RBP17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF665Q9H7R5 613 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 C1orf123Q9NWV4 160 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 SCN3BQ9NY72 215 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 CLEC2DQ9UHP7 191 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 C2CD3Q4AC94 2353 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 ANKRD61A6NGH8 418 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 ZFPL1O95159 310 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 CEP78Q5JTW2 689 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 PLCXD3Q63HM9 321 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 RPL22L1Q6P5R6 122 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 RDH10Q8IZV5 341 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF676Q8N7Q3 588 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 MSI2Q96DH6 328 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 COMMD4Q9H0A8 199 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 BABAM2Q9NXR7 383 aa17.69■□□□□ 0.42
SHCBP1-205ENST00000566016 NAV3Q8IVL0 2385 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 ZFHX3Q15911 3703 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 PPIAL4EA0A075B759 164 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 B4DSR2 109 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 PPIAL4DF5H284 164 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 LHBP01229 141 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 CDK1P06493 297 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 PPIAL4FP0DN26 164 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 C21orf33P30042 268 aaPredicted RBP17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 GPM6AP51674 278 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 SLC35A2P78381 396 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 CDK5R1Q15078 307 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 WDR82Q6UXN9 313 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 GCSAMQ8N6F7 178 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 LINC01356Q8N9X3 169 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 OR5AK2Q8NH90 309 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 MYDGFQ969H8 173 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 TRIM36Q9NQ86 728 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 PPIAL4AQ9Y536 164 aa17.68■□□□□ 0.42
SHCBP1-205ENST00000566016 TRBV2A0A0J9YWF9 115 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 GATBO75879 557 aaKnown RBP17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 RBMXP38159 391 aaKnown RBP17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF404Q494X3 552 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF826PQ6ZT77 177 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 MOB3CQ70IA8 216 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 OR10Z1Q8NGY1 313 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 CDCA4Q9BXL8 241 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 OR51I2Q9H344 312 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 TMEM165Q9HC07 324 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 TPRKBQ9Y3C4 175 aa17.67■□□□□ 0.42
SHCBP1-205ENST00000566016 hCG_1807616A0A1W2PRN6 198 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF732B4DXR9 585 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 MYL12BO14950 172 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 ZNF16P17020 682 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 GTF2A1P52655 376 aaPredicted RBP17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 TAS2R43P59537 309 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 KCNJ8Q15842 424 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 XAF1Q6GPH4 301 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 KCTD8Q6ZWB6 473 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 UTS2BQ765I0 119 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 SCCPDHQ8NBX0 429 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 OR51A4Q8NGJ6 313 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 SMIM19Q96E16 107 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 PDCD1LG2Q9BQ51 273 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 RASSF4Q9H2L5 321 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 Q9H521 79 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 DUSP21Q9H596 190 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 PATZ1Q9HBE1 687 aaKnown RBP17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 ERGIC3Q9Y282 383 aa17.66■□□□□ 0.42
SHCBP1-205ENST00000566016 PQLC2LA1A4F0 135 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 SRRM5B3KS81 715 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 F5H0A9 414 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 LGALS8O00214 317 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 CDIPTO14735 213 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 OGG1O15527 345 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 SERPINA3P01011 423 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 WNT4P56705 351 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 FAM166AQ6J272 317 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 OR10AC1Q8NH08 325 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 ADAT3Q96EY9 351 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 CNBD2Q96M20 576 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 GPR173Q9NS66 373 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 PAK1IP1Q9NWT1 392 aaPredicted RBP17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 UBAP1Q9NZ09 502 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 PCDHB10Q9UN67 800 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 PCDHGB5Q9Y5G0 923 aa17.65■□□□□ 0.42
SHCBP1-205ENST00000566016 A6NIN4 97 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 CEACAM18A8MTB9 384 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 FAM157AC9JC47 383 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 PTGES3LE9PB15 166 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 H3BSH0 61 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 LMX1BO60663 402 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 LALBAP00709 142 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 MSMBP08118 114 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 CRHBPP24387 322 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 FAM201AQ5SY85 155 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 TEX36Q5VZQ5 186 aa17.64■□□□□ 0.41
SHCBP1-205ENST00000566016 DCDC5Q6ZRR9 648 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms