RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 LHX8Q68G74 356 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF425Q6IV72 752 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 PP6455Q8WZ26 134 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 USP54Q70EL1 1684 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 LINC01387J3KSC0 135 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 MPLP40238 635 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 OPRK1P41145 380 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ASCL1P50553 236 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 A0A1B0GUH1 482 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 F5H697 171 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 EPXP11678 715 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 FAM3AP98173 230 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ACSM6Q6P461 480 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ST8SIA2Q92186 375 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ARRDC5A6NEK1 342 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 SNRPGP15A8MWD9 76 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 MASP2O00187 686 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 CXCL10P02778 98 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 S100A8P05109 93 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 LIMS3P0CW19 117 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 LIMS4P0CW20 117 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 COX7A1P24310 79 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 METAP1P53582 386 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 PAX5Q02548 391 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF574Q6ZN55 896 aaPredicted RBP12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 OR4C3Q8NH37 302 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 UCK1Q9HA47 277 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 OCIAD1Q9NX40 245 aa12.2□□□□□ -0.46
CX3CL1-204ENST00000565912 PPM1DO15297 605 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 FCGR3BO75015 233 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 ONECUT2O95948 504 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 SP6Q3SY56 376 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 OTOSQ8NHW6 89 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 WDR89Q96FK6 387 aaPredicted RBP12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 FGF20Q9NP95 211 aaPredicted RBP12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 DUSP21Q9H596 190 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 CNTRLQ7Z7A1 2325 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 GPANK1O95872 356 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 LIMK1P53667 647 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 RIMKLAQ8IXN7 391 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM208Q9BTX3 173 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM147Q9BVK8 224 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 CLDN20P56880 219 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 HTRA4P83105 476 aaPredicted RBP12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF117Q03924 483 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 VAMP3Q15836 100 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 Q8IYB0 196 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 C10orf90Q96M02 699 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 VN1R1Q9GZP7 353 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 R4GN57 208 aa12.19□□□□□ -0.46
CX3CL1-204ENST00000565912 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 SLC16A12Q6ZSM3 486 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 ZNF71Q9NQZ8 489 aaPredicted RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 RPL34P49207 117 aaKnown RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 FMODQ06828 376 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM267Q0VDI3 215 aaPredicted RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 FAHD1Q6P587 224 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 OR4F17Q8NGA8 305 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 OR1L3Q8NH93 324 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 C12orf10Q9HB07 376 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 LSM2Q9Y333 95 aaKnown RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 K7EQS6 105 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 FZD6O60353 706 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 SCGB1C2P0DMR2 95 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 TMPRSS11FQ6ZWK6 438 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 NME1P15531 152 aaKnown RBP12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 RHOBP62745 196 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 HYAL1Q12794 435 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 NPEPL1Q8NDH3 523 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM18Q96B42 140 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 TAAR3PQ9P1P4 343 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 NAGKQ9UJ70 344 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 NPTNQ9Y639 398 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 SLC17A2O00624 439 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 HRASP01112 189 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 B4GALNT1Q00973 533 aa12.18□□□□□ -0.46
CX3CL1-204ENST00000565912 CYR61O00622 381 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 AVPR2P30518 371 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 OR3A4PP47883 348 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 LINC00303Q3SY05 128 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 SPSB1Q96BD6 273 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 VPS25Q9BRG1 176 aa12.17□□□□□ -0.46
CX3CL1-204ENST00000565912 WDR61Q9GZS3 305 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms