RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GAFA1Q96PS6 74 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 CHIAQ9BZP6 476 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 PBOV1Q9GZY1 135 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 ZNF696Q9H7X3 374 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 MMP24Q9Y5R2 645 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 FAM181BA6NEQ2 426 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 M0R129 80 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 AKR7A2O43488 359 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 NDUFB3O43676 98 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 ZNF254O75437 659 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 TFF1P04155 84 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 ATP6V1B1P15313 513 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 OMGP23515 440 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 EPHA2P29317 976 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 GPM6AP51674 278 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 GMFBP60983 142 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 MFGE8Q08431 387 aaPredicted RBP12.89□□□□□ -0.35
CDH3-204ENST00000565453 IKZF1Q13422 519 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 ATP6AP1Q15904 470 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 AADACL4Q5VUY2 407 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 SLX4IPQ5VYV7 408 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 KCTD8Q6ZWB6 473 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
CDH3-204ENST00000565453 VMO1Q7Z5L0 202 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 LDLRAD3Q86YD5 345 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 ASB17Q8WXJ9 295 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 PPP1R14AQ96A00 147 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 MROQ9BYG7 248 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 SLITRK2Q9H156 845 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 SNTG1Q9NSN8 517 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 NUFIP1Q9UHK0 495 aaKnown RBP12.89□□□□□ -0.35
CDH3-204ENST00000565453 POMT1Q9Y6A1 747 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
CDH3-204ENST00000565453 A0A0U1RQK1 487 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 A0A1B0GVI7 797 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 SIGLEC5O15389 551 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 RHBDL1O75783 438 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 RIDAP52758 137 aaKnown RBP12.88□□□□□ -0.35
CDH3-204ENST00000565453 GNG3P63215 75 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 RELBQ01201 579 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 DGUOKQ16854 277 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 CEACAM21Q3KPI0 293 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 LRRC10Q5BKY1 277 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 METAP1DQ6UB28 335 aaPredicted RBP12.88□□□□□ -0.35
CDH3-204ENST00000565453 FIP1L1Q6UN15 594 aaKnown RBP12.88□□□□□ -0.35
CDH3-204ENST00000565453 Q8N7P7 452 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 OR51E1Q8TCB6 317 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
CDH3-204ENST00000565453 HIST1H2AAQ96QV6 131 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
CDH3-204ENST00000565453 GABARAPL1Q9H0R8 117 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 ADGRL4Q9HBW9 690 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 GPR84Q9NQS5 396 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 C1RLQ9NZP8 487 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 ONECUT1Q9UBC0 465 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 NLKQ9UBE8 527 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 DNAJB11Q9UBS4 358 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 ZNF222Q9UK12 451 aa12.88□□□□□ -0.35
CDH3-204ENST00000565453 NKX6-3A6NJ46 265 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 ZNF732B4DXR9 585 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 NDUFA7O95182 113 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 TTRP02766 147 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 ACAA1P09110 424 aaPredicted RBP12.87□□□□□ -0.35
CDH3-204ENST00000565453 RIPPLY1Q0D2K3 151 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 ZNF829Q3KNS6 432 aaPredicted RBP12.87□□□□□ -0.35
CDH3-204ENST00000565453 DMRTC1Q5HYR2 192 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 CEP78Q5JTW2 689 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 NXNL2Q5VZ03 156 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 PDZD9Q8IXQ8 264 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 TMEM163Q8TC26 289 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 SSMEM1Q8WWF3 244 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 AQP3Q92482 292 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 PRRG3Q9BZD7 231 aa12.87□□□□□ -0.35
CDH3-204ENST00000565453 IGKV1D-17A0A075B6S4 117 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 OR5B21A6NL26 309 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 OR2AT4A6NND4 320 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 G3V2T6 193 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 MAGEB4O15481 346 aaPredicted RBP12.86□□□□□ -0.35
CDH3-204ENST00000565453 DHRS3O75911 302 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 PSG2P11465 335 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 FAHP16930 419 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 GLRA1P23415 457 aa12.86□□□□□ -0.35
CDH3-204ENST00000565453 IER3P46695 156 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms