RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NLKQ9UBE8 527 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 DUX4Q9UBX2 424 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 SLC25A10Q9UBX3 287 aaPredicted RBP5.29□□□□□ -1.56
TCF4-228ENST00000565393 IKZF2Q9UKS7 526 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 KLHDC2Q9Y2U9 406 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 LRP12Q9Y561 859 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 KPTNQ9Y664 436 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 POMT1Q9Y6A1 747 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 TMEM14AQ9Y6G1 99 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 COL6A5A8TX70 2615 aa5.29□□□□□ -1.56
TCF4-228ENST00000565393 ZNF816-ZNF321PA0A0X1KG74 233 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 CLPSL1A2RUU4 121 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ANKRD61A6NGH8 418 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OR2AT4A6NND4 320 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 G3V2T6 193 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 H0YAE9 185 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 NPFFO15130 113 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 GPR137BO60478 399 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ZNF254O75437 659 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 MTRF1O75570 445 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 FCN3O75636 299 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 RHBDL1O75783 438 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 DNAJC8O75937 253 aaPredicted RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 NRASP01111 189 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 IGHV4-59P01825 116 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ACAA1P09110 424 aaPredicted RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 AMY2BP19961 511 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 DAPP51397 102 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 RIDAP52758 137 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 DLX1P56177 255 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ESRRGP62508 458 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 GNG3P63215 75 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 GUCA2AQ02747 115 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 RIPPLY1Q0D2K3 151 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 PTGES3Q15185 160 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 DGUOKQ16854 277 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 CEACAM21Q3KPI0 293 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 FAM76BQ5HYJ3 339 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 LCN1P1Q5VSP4 162 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 PLCXD3Q63HM9 321 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OLFML2AQ68BL7 652 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 BRICD5Q6PL45 260 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 DEGS2Q6QHC5 323 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 MEPCEQ7L2J0 689 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 BCDIN3DQ7Z5W3 292 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 ZNF679Q8IYX0 411 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 PIP4P2Q8N4L2 257 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ZNRF1Q8ND25 227 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 TMEM185AQ8NFB2 350 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OR10Z1Q8NGY1 313 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OR5K1Q8NHB7 308 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OR51E1Q8TCB6 317 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 NPRL2Q8WTW4 380 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 DUS3LQ96G46 650 aaKnown RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 RAB3IPQ96QF0 476 aaPredicted RBP5.28□□□□□ -1.56
TCF4-228ENST00000565393 APOL4Q9BPW4 351 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 TTTY10Q9BZA0 68 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 DNTTIP1Q9H147 329 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 TLNRD1Q9H1K6 362 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 OR51I2Q9H344 312 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 FAM206AQ9NX38 181 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 RASL12Q9NYN1 266 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 POMPQ9Y244 141 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 PIGLQ9Y2B2 252 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 RNF114Q9Y508 228 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 MMP24Q9Y5R2 645 aa5.28□□□□□ -1.56
TCF4-228ENST00000565393 ATRQ13535 2644 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 A0A0U1RQV5 110 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 TCRBV3S1A0A5B6 114 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 MEIOCA2RUB1 952 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 A6NIN4 97 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 ZNF670-ZNF695F2Z2N8 137 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 RNASEK-C17orf49H0YIS7 233 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 DYNC1I1O14576 645 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 SIGLEC5O15389 551 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 MAGEB4O15481 346 aaPredicted RBP5.27□□□□□ -1.57
TCF4-228ENST00000565393 KCNAB3O43448 404 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 WIPF1O43516 503 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 PRKYO43930 277 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 MITFO75030 526 aaPredicted RBP5.27□□□□□ -1.57
TCF4-228ENST00000565393 NDUFA7O95182 113 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 FBP1P09467 338 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 PSG2P11465 335 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 SELLP14151 372 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 ATP6V1B1P15313 513 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 PRDX2P32119 198 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 DCTDP32321 178 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 ATP6V1E1P36543 226 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 PSMA6P60900 246 aaKnown RBP5.27□□□□□ -1.57
TCF4-228ENST00000565393 CXCR4P61073 352 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 RELBQ01201 579 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 DEFA6Q01524 100 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 ZNF829Q3KNS6 432 aaPredicted RBP5.27□□□□□ -1.57
TCF4-228ENST00000565393 ZNF684Q5T5D7 378 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 STUMQ69YW2 141 aa5.27□□□□□ -1.57
TCF4-228ENST00000565393 HAGHLQ6PII5 290 aaPredicted RBP5.27□□□□□ -1.57
TCF4-228ENST00000565393 ZNF322Q6U7Q0 402 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms