RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 F5H5K5 113 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 J3QW42 95 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
RNF40-205ENST00000563909 TOX4O94842 621 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 APOC1P02654 83 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 DBHP09172 617 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 GNAO1P09471 354 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 H2BFMP0C1H6 154 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 DBTP11182 482 aaKnown RBP13.13□□□□□ -0.31
RNF40-205ENST00000563909 TUBG1P23258 451 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 HSD11B1P28845 292 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 CFHR2P36980 270 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 HCCSP53701 268 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 ZNF91Q05481 1191 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 PSG7Q13046 419 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 KLHL22Q53GT1 634 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
RNF40-205ENST00000563909 CNIH3Q8TBE1 160 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 SLC7A6Q92536 515 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 COG8Q96MW5 612 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 OCSTAMPQ9BR26 566 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 FN3KRPQ9HA64 309 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 FBLN5Q9UBX5 448 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 CLN8Q9UBY8 286 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
RNF40-205ENST00000563909 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 M0R135 149 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 GABRA5P31644 462 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 TGFBR2P37173 567 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OPRL1P41146 370 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 ACTC1P68032 377 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 ACTA1P68133 377 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 RAB40BQ12829 278 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 RSPO1Q2MKA7 263 aaPredicted RBP13.12□□□□□ -0.31
RNF40-205ENST00000563909 DEGS2Q6QHC5 323 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 DRAM2Q6UX65 266 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 NLRC3Q7RTR2 1065 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 KRT77Q7Z794 578 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 SCCPDHQ8NBX0 429 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OR10H4Q8NGA5 316 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OR4S1Q8NGB4 309 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OR8B3Q8NGG8 313 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OR5L1Q8NGL2 311 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 FBLIM1Q8WUP2 373 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 CFHR4Q92496 578 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 ZNF799Q96GE5 643 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 OR8B2Q96RD0 313 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 AMELYQ99218 206 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 TMEM246Q9BRR3 403 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 MROQ9BYG7 248 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 NIPAL2Q9H841 368 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 SP140LQ9H930 580 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
RNF40-205ENST00000563909 COPS3Q9UNS2 423 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 EXOGQ9Y2C4 368 aaKnown RBP13.12□□□□□ -0.31
RNF40-205ENST00000563909 KLHDC2Q9Y2U9 406 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 SIGLEC9Q9Y336 463 aa13.12□□□□□ -0.31
RNF40-205ENST00000563909 IRGMA1A4Y4 181 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 ENSAO43768 121 aaKnown RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 ZNF254O75437 659 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 APOL3O95236 402 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 FADS2O95864 444 aaKnown RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 MYF6P23409 242 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 OTX1P32242 354 aaPredicted RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 MMP16P51512 607 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 CXCR4P61073 352 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 ROM1Q03395 351 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 ZNF322Q6U7Q0 402 aaPredicted RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 ZNF679Q8IYX0 411 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 LHX4Q969G2 390 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 APOBEC3DQ96AK3 386 aaPredicted RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 LGALS12Q96DT0 336 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 OR8B4Q96RC9 309 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 MYCBPQ99417 103 aaPredicted RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 ZNF184Q99676 751 aaPredicted RBP13.11□□□□□ -0.31
RNF40-205ENST00000563909 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 AMBNQ9NP70 447 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 VPREB3Q9UKI3 123 aa13.11□□□□□ -0.31
RNF40-205ENST00000563909 A0A1W2PQL4 384 aaPredicted RBP13.1□□□□□ -0.31
RNF40-205ENST00000563909 BTBD17A6NE02 478 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 ZNF879B4DU55 563 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 C22orf46C9J442 243 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 LCATP04180 440 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 PRKXP51817 358 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 CSNK2BP67870 215 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 DOC2BQ14184 412 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
RNF40-205ENST00000563909 NSUN5P1Q3KNT7 163 aa13.1□□□□□ -0.31
RNF40-205ENST00000563909 WDR25Q64LD2 544 aaPredicted RBP13.1□□□□□ -0.31
RNF40-205ENST00000563909 Q6ZR03 302 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms