RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 FLRT3Q9NZU0 649 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 A0A0B4J2E0 115 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 A0A1B0GX12 115 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 PRRT4C9JH25 899 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 CLDN34H7C241 214 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 ABHD16AO95870 558 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 AGR2O95994 175 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 PCCBP05166 539 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 SRP19P09132 144 aaKnown RBP16.52■□□□□ 0.24
RAB40C-206ENST00000561781 SELEP16581 610 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 PPP1CCP36873 323 aaKnown RBP16.52■□□□□ 0.24
RAB40C-206ENST00000561781 SLC25A1P53007 311 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 SLC37A1P57057 533 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 PLAURQ03405 335 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 CEBPEQ15744 281 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 TIPARPQ7Z3E1 657 aaKnown RBP16.52■□□□□ 0.24
RAB40C-206ENST00000561781 MRPL41Q8IXM3 137 aaKnown RBP16.52■□□□□ 0.24
RAB40C-206ENST00000561781 NOXO1Q8NFA2 376 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 ACY3Q96HD9 319 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 ANGPTL4Q9BY76 406 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 NMNAT2Q9BZQ4 307 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 SERINC1Q9NRX5 453 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 ENTPD2Q9Y5L3 495 aa16.52■□□□□ 0.24
RAB40C-206ENST00000561781 IGKV1-8A0A0C4DH67 115 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 XKRY2A2RUG3 117 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 C4orf47A7E2U8 309 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 XKRYO14609 159 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 KLK2P20151 261 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 PDLIM4P50479 330 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 VASPP50552 380 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-206ENST00000561781 SELENOTP62341 195 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 SPEM2Q0P670 501 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 APCDD1LQ8NCL9 501 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 OR2L2Q8NH16 312 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 CYB5D2Q8WUJ1 264 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 DNASE2BQ8WZ79 361 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 SERINC2Q96SA4 455 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 ZNF2Q9BSG1 426 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-206ENST00000561781 MSL2Q9HCI7 577 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 IKZF2Q9UKS7 526 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 POLR3KQ9Y2Y1 108 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-206ENST00000561781 A0A1B0GWA3 101 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 P2RY1P47900 373 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 KLF3P57682 345 aaPredicted RBP16.51■□□□□ 0.23
RAB40C-206ENST00000561781 METRNLQ641Q3 311 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 ABHD17CQ6PCB6 329 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 KIRREL2Q6UWL6 708 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 SLC16A9Q7RTY1 509 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 C11orf42Q8N5U0 333 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 TSSK2Q96PF2 358 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 PRRX2Q99811 253 aa16.51■□□□□ 0.23
RAB40C-206ENST00000561781 MASP2O00187 686 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 RRP8O43159 456 aaKnown RBP16.5■□□□□ 0.23
RAB40C-206ENST00000561781 GSTP1P09211 210 aaKnown RBP16.5■□□□□ 0.23
RAB40C-206ENST00000561781 CCKBRP32239 447 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 CEBPGP53567 150 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 C1orf189Q5VU69 101 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 NUFIP2Q7Z417 695 aaKnown RBP16.5■□□□□ 0.23
RAB40C-206ENST00000561781 FAM160A2Q8N612 972 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-206ENST00000561781 OR8G5Q8NG78 346 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 TMEM230Q96A57 120 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 PTX4Q96A99 478 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 NUDT9Q9BW91 350 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 OR2J1Q9GZK6 312 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 GPR132Q9UNW8 380 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 A6NIZ1 184 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 NKX6-3A6NJ46 265 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 DEDDO75618 318 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 C1QL1O75973 258 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 SCGNO76038 276 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 SCGB1D1O95968 90 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 FUT3P21217 361 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 OR10J1P30954 320 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 BCL6P41182 706 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 HSF1Q00613 529 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 SGCGQ13326 291 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 ARHGAP19Q14CB8 494 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 ANKRD55Q3KP44 614 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 Q6ZS52 159 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 GVQW1Q8N7I0 195 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 DOK4Q8TEW6 326 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 SCGB3A2Q96PL1 93 aa16.5■□□□□ 0.23
RAB40C-206ENST00000561781 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.5■□□□□ 0.23
RAB40C-206ENST00000561781 LAMA1P25391 3075 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 HPRT1P00492 218 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 OPN1MWP04001 364 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 OPN1MW2P0DN77 364 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 OPN1MW3P0DN78 364 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 HLA-DRB3P79483 266 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 MLF2Q15773 248 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-206ENST00000561781 SLC22A6Q4U2R8 563 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 DCST2Q5T1A1 773 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 LINC01555Q8NAE3 123 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 FAM213BQ8TBF2 198 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 OIT3Q8WWZ8 545 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 KTI12Q96EK9 354 aaPredicted RBP16.49■□□□□ 0.23
RAB40C-206ENST00000561781 HIST1H2AAQ96QV6 131 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 PCBD2Q9H0N5 130 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 C5orf66Q9H5L9 145 aa16.49■□□□□ 0.23
RAB40C-206ENST00000561781 SRD5A3Q9H8P0 318 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms