RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 GABARAPL1Q9H0R8 117 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 ADGRL4Q9HBW9 690 aa20.85■□□□□ 0.93
NME3-202ENST00000561637 POM121CA8CG34 1229 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 P2RY10O00398 339 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 SRSF10O75494 262 aaKnown RBP20.84■□□□□ 0.93
NME3-202ENST00000561637 FAHP16930 419 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 IL13RA1P78552 427 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 MEPCEQ7L2J0 689 aaKnown RBP20.84■□□□□ 0.93
NME3-202ENST00000561637 COMMD2Q86X83 199 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 PNLDC1Q8NA58 520 aaKnown RBP20.84■□□□□ 0.93
NME3-202ENST00000561637 TMEM163Q8TC26 289 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 SLC25A28Q96A46 364 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 RAB3IPQ96QF0 476 aaPredicted RBP20.84■□□□□ 0.93
NME3-202ENST00000561637 CIB1Q99828 191 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 SLITRK2Q9H156 845 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 SEMA6AQ9H2E6 1030 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 HAO2Q9NYQ3 351 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 AP4S1Q9Y587 144 aa20.84■□□□□ 0.93
NME3-202ENST00000561637 A0A0U1RQV5 110 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 ZNF816-ZNF321PA0A0X1KG74 233 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 TMEM210A6NLX4 147 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 CLDN34H7C241 214 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 APOL3O95236 402 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 IGLV3-1P01715 115 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 MDKP21741 143 aaPredicted RBP20.83■□□□□ 0.93
NME3-202ENST00000561637 OMGP23515 440 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 TGM4P49221 684 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 FAM76BQ5HYJ3 339 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 METTL11BQ5VVY1 283 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 KCTD18Q6PI47 426 aaPredicted RBP20.83■□□□□ 0.93
NME3-202ENST00000561637 SSX6Q7RTT6 188 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 SLC35F2Q8IXU6 374 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 ZNF679Q8IYX0 411 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 FTMTQ8N4E7 242 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 ZDHHC16Q969W1 377 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 GAFA1Q96PS6 74 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 MROQ9BYG7 248 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 ZMAT3Q9HA38 289 aaKnown RBP20.83■□□□□ 0.93
NME3-202ENST00000561637 DNAJB11Q9UBS4 358 aa20.83■□□□□ 0.93
NME3-202ENST00000561637 ZNF732B4DXR9 585 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 TTRP02766 147 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 FASP25445 335 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 CXCR4P61073 352 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 SRSF4Q08170 494 aaKnown RBP20.82■□□□□ 0.92
NME3-202ENST00000561637 DGUOKQ16854 277 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 DEGS2Q6QHC5 323 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 ZNF322Q6U7Q0 402 aaPredicted RBP20.82■□□□□ 0.92
NME3-202ENST00000561637 OR10Z1Q8NGY1 313 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 OR51I2Q9H344 312 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 PRDM13Q9H4Q3 707 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 ELL3Q9HB65 397 aaPredicted RBP20.82■□□□□ 0.92
NME3-202ENST00000561637 ONECUT1Q9UBC0 465 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 ZNF391Q9UJN7 358 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 GTF2A1LQ9UNN4 478 aa20.82■□□□□ 0.92
NME3-202ENST00000561637 LIPFP07098 398 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 MAP2K3P46734 347 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 RIDAP52758 137 aaKnown RBP20.81■□□□□ 0.92
NME3-202ENST00000561637 SNCBQ16143 134 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 MOB3CQ70IA8 216 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 VMO1Q7Z5L0 202 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 LY6G5BQ8NDX9 201 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 ANGPTL6Q8NI99 470 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 ASB17Q8WXJ9 295 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 DUS3LQ96G46 650 aaKnown RBP20.81■□□□□ 0.92
NME3-202ENST00000561637 TBX5Q99593 518 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 NUFIP1Q9UHK0 495 aaKnown RBP20.81■□□□□ 0.92
NME3-202ENST00000561637 MRM2Q9UI43 246 aaKnown RBP20.81■□□□□ 0.92
NME3-202ENST00000561637 PIGLQ9Y2B2 252 aa20.81■□□□□ 0.92
NME3-202ENST00000561637 IGHV1-69DA0A0B4J2H0 117 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 A0A0U1RQK1 487 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 A6NIN4 97 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 SAC3D1A6NKF1 404 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 IGHV1-69P01742 117 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 MELTFP08582 738 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 NXNL2Q5VZ03 156 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 ZNF788Q6ZQV5 615 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 KRT74Q7RTS7 529 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 SLC36A1Q7Z2H8 476 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 ZDHHC13Q8IUH4 622 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 C12orf43Q96C57 262 aaKnown RBP20.8■□□□□ 0.92
NME3-202ENST00000561637 ZNF488Q96MN9 340 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 CNTD2Q9H8S5 307 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 ABCB9Q9NP78 766 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 SIRT7Q9NRC8 400 aa20.8■□□□□ 0.92
NME3-202ENST00000561637 ACOD1A6NK06 481 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 H3BSH0 61 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 NDUFB3O43676 98 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 ZNF254O75437 659 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 ECDO95905 644 aaPredicted RBP20.79■□□□□ 0.92
NME3-202ENST00000561637 KLRD1Q13241 179 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 OCLNQ16625 522 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 ZNF829Q3KNS6 432 aaPredicted RBP20.79■□□□□ 0.92
NME3-202ENST00000561637 ATPAF1Q5TC12 328 aaPredicted RBP20.79■□□□□ 0.92
NME3-202ENST00000561637 PLCXD3Q63HM9 321 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 Q6YL49 198 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 PIP4P2Q8N4L2 257 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 OR51G2Q8NGK0 314 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 GATAD2BQ8WXI9 593 aa20.79■□□□□ 0.92
NME3-202ENST00000561637 H1FXQ92522 213 aaKnown RBP20.79■□□□□ 0.92
NME3-202ENST00000561637 DCTN5Q9BTE1 182 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms