RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 OR5V1Q9UGF6 321 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 UBQLN2Q9UHD9 624 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 ING4Q9UNL4 249 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 PPP1R3CQ9UQK1 317 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 STARD10Q9Y365 291 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 LYVE1Q9Y5Y7 322 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 U3KQ87 197 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 TANC2Q9HCD6 1990 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 TRAV27A0A087WT01 109 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 A0A087WUU8 490 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 IGHV2-70DA0A0C4DH43 119 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 A0A1B0GUS0 222 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 PRSS37A4D1T9 235 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 ZNF729A6NN14 1252 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 LINC00587B1AMM8 73 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SGCEO43556 437 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 DOK2O60496 412 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 CD14P08571 375 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 FBP1P09467 338 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 IGHV4-38-2P0DP08 117 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 CTLA4P16410 223 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 GUCA1AP43080 201 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 GATA4P43694 442 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 HTR5AP47898 357 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 MTNR1AP48039 350 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 AKR1D1P51857 326 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 CXCR4P61073 352 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SELENOWP63302 87 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 HIST1H3AP68431 136 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SCN1BQ07699 218 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 FGL1Q08830 312 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 KRBOX4Q5JUW0 171 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SYT6Q5T7P8 510 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 HIST2H3PS2Q5TEC6 136 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 GPR139Q6DWJ6 353 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SLC27A4Q6P1M0 643 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 LRRN1Q6UXK5 716 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 COLCA1Q6ZS62 124 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 TMPRSS11FQ6ZWK6 438 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 HIST2H3AQ71DI3 136 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 RDH10Q8IZV5 341 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 OR2Z1Q8NG97 314 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 OR13C2Q8NGS9 318 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 Q8TCH9 128 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 CYGBQ8WWM9 190 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 ACOT11Q8WXI4 607 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 LRTOMTQ8WZ04 291 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 OTULINQ96BN8 352 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 CMBLQ96DG6 245 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 YIPF6Q96EC8 236 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 MEGF10Q96KG7 1140 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 OR5M11Q96RB7 305 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 ALX4Q9H161 411 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 SAV1Q9H4B6 383 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 ANKRD19PQ9H560 264 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 OPA3Q9H6K4 179 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 EMC7Q9NPA0 242 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 SPAG4Q9NPE6 437 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 VSX1Q9NZR4 365 aaPredicted RBP7.02□□□□□ -1.29
PALB2-202ENST00000561514 ASH2LQ9UBL3 628 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 MLXQ9UH92 298 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 ARHGAP32A7KAX9 2087 aa7.02□□□□□ -1.29
PALB2-202ENST00000561514 A0A075B6Q4 140 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 KIR2DS1A0A191URI9 304 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 A0A1W2PPL8 197 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 hCG_1807616A0A1W2PRN6 198 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 IQCF6A8MYZ5 107 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 EFCAB9A8MZ26 197 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 H7C1C5 153 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 CDC42EP2O14613 210 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 MRASO14807 208 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 PHYHO14832 338 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 MLNRO43193 412 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 PTBP3O95758 552 aaKnown RBP7.01□□□□□ -1.29
PALB2-202ENST00000561514 TXNDC12O95881 172 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 SPI1P17947 270 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 PTBP1P26599 531 aaKnown RBP eCLIP7.01□□□□□ -1.29
PALB2-202ENST00000561514 RBMXP38159 391 aaKnown RBP7.01□□□□□ -1.29
PALB2-202ENST00000561514 POU3F4P49335 361 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 LCN6P62502 163 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 ASAH1Q13510 395 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 TRAM2Q15035 370 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 RFX4Q33E94 735 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 MBOAT2Q6ZWT7 520 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 TSEN54Q7Z6J9 526 aaKnown RBP7.01□□□□□ -1.29
PALB2-202ENST00000561514 OAFQ86UD1 273 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 DHFR2Q86XF0 187 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 KLBQ86Z14 1044 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 CBR4Q8N4T8 237 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 TMEM86BQ8N661 226 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 CELF2-AS1Q8N7Q2 184 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 ATG16L2Q8NAA4 619 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 SETD9Q8NE22 299 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 OR2T12Q8NG77 320 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 OR8G5Q8NG78 346 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 OR52E2Q8NGJ4 325 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 OR51A7Q8NH64 312 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 OR1F12Q8NHA8 337 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 WFDC12Q8WWY7 111 aa7.01□□□□□ -1.29
PALB2-202ENST00000561514 RAB40AQ8WXH6 277 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms