RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SERPIND1P05546 499 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 P0C879 139 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PABPC4LP0CB38 370 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 COX5AP20674 150 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GABRR1P24046 479 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LOXP28300 417 aaPredicted RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 GCAP28676 217 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LHX2P50458 406 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PKNOX1P55347 436 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 RAB8AP61006 207 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ARFRP1Q13795 201 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 EBPQ15125 230 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 ZMYND11Q15326 602 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GUSBP1Q15486 140 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 C6orf52Q5T4I8 152 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ZNF470Q6ECI4 717 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 FAM45BPQ6NSW5 357 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 TGIF2LXQ8IUE1 241 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CPNE9Q8IYJ1 553 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ACOT4Q8N9L9 421 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 BHLHE23Q8NDY6 225 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 FAM83FQ8NEG4 500 aaPredicted RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 BBS1Q8NFJ9 593 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 OR10G3Q8NGC4 313 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 OR6K3Q8NGY3 331 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 FAM45AQ8TCE6 357 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 EEF1AKMT1Q8WVE0 214 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PIGCQ92535 297 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 MARC2Q969Z3 335 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LRRC39Q96DD0 335 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PIK3IP1Q96FE7 263 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CMTM7Q96FZ5 175 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 COQ2Q96H96 371 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CAPZA3Q96KX2 299 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 JSRP1Q96MG2 331 aaPredicted RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 RILPQ96NA2 401 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CLCC1Q96S66 551 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GPR21Q99679 349 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GAL3ST1Q99999 423 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 EBF4Q9BQW3 602 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 TMEM43Q9BTV4 400 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 STMN4Q9H169 189 aaPredicted RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 RPF2Q9H7B2 306 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 RNF122Q9H9V4 155 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LYARQ9NX58 379 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 SIGLEC8Q9NYZ4 499 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 IFNKQ9P0W0 207 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PSME2Q9UL46 239 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CLEC4AQ9UMR7 237 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 PRPF19Q9UMS4 504 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 IFT52Q9Y366 437 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 HYOU1Q9Y4L1 999 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 TIMM10BQ9Y5J6 103 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 RP1P56715 2156 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 AKAP9Q99996 3911 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LRP4O75096 1905 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ADGRG4Q8IZF6 3080 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 HIVEP1P15822 2718 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 CELSR2Q9HCU4 2923 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA6L10A6NI86 522 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 OR6C70A6NIJ9 312 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SLC22A20A6NK97 555 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 ZFP92A6NM28 416 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 H7C417 338 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 FOXE1O00358 373 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 RGS16O15492 202 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 ICOSLGO75144 302 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SS18L1O75177 396 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 SNNO75324 88 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 STK16O75716 305 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SEMA3DO95025 777 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 DIRAS1O95057 198 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 AIFM1O95831 613 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 OPN1MWP04001 364 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 GIG44P09565 113 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 IFI6P09912 130 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 OPN1MW2P0DN77 364 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 OPN1MW3P0DN78 364 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 PGAM1P18669 254 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 CPN2P22792 545 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 HTR1FP30939 366 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 LCN1P31025 176 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 MAP3K8P41279 467 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SLC1A2P43004 574 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 MAGEA3P43357 314 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 PPICP45877 212 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 MARCKSL1P49006 195 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 DSCR4P56555 118 aaPredicted RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 ATP6V0D1P61421 351 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 BASP1P80723 227 aaKnown RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 TNFRSF17Q02223 184 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SPANXN3Q5MJ09 141 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 KHDRBS2Q5VWX1 349 aaKnown RBP2.69□□□□□ -1.98
HERC1-215ENST00000561436 OR52E8Q6IFG1 317 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 ZNF544Q6NX49 715 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 MED27Q6P2C8 311 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 CLEC2AQ6UVW9 174 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 SBSNQ6UWP8 590 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 LUZP2Q86TE4 346 aa2.69□□□□□ -1.98
HERC1-215ENST00000561436 VRK2Q86Y07 508 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms