RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PAK1IP1Q9NWT1 392 aaPredicted RBP9.07□□□□□ -0.96
TPM1-229ENST00000561242 RASL12Q9NYN1 266 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 ZNF319Q9P2F9 582 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 CLEC2DQ9UHP7 191 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 KCNS2Q9ULS6 477 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 WIPI2Q9Y4P8 454 aa9.07□□□□□ -0.96
TPM1-229ENST00000561242 ANKHD1Q8IWZ3 2542 aaKnown RBP9.06□□□□□ -0.96
TPM1-229ENST00000561242 ALPK2Q86TB3 2170 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 USP9YO00507 2555 aaPredicted RBP9.06□□□□□ -0.96
TPM1-229ENST00000561242 A0A087WXM4 84 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 LOC100289279A0A1B0GTE1 492 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 B4DSR2 109 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 LGALS8O00214 317 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 MLNRO43193 412 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 ZFPL1O95159 310 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 TGFAP01135 160 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 CSTBP04080 98 aaKnown RBP9.06□□□□□ -0.96
TPM1-229ENST00000561242 TMEM225BP0DP42 221 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 CCL1P22362 96 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 PSMB9P28065 219 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 GABRA2P47869 451 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 POU3F4P49335 361 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 GTF2A1P52655 376 aaPredicted RBP9.06□□□□□ -0.96
TPM1-229ENST00000561242 GNB2P62879 340 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 GPR50Q13585 617 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 SMIM21Q3B7S5 101 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 Q499Y3 187 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 TMEM155Q4W5P6 130 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 CD276Q5ZPR3 534 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 FAM166AQ6J272 317 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 BTNL3Q6UXE8 466 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 ZNF367Q7RTV3 350 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 GLCCI1Q86VQ1 547 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 OR10Z1Q8NGY1 313 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 OR51F2Q8NH61 342 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 PPP1R35Q8TAP8 253 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 DVL3Q92997 716 aaPredicted RBP9.06□□□□□ -0.96
TPM1-229ENST00000561242 YIPF5Q969M3 257 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 MED30Q96HR3 178 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 PDCD1LG2Q9BQ51 273 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 CHST5Q9GZS9 411 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 FAM192AQ9GZU8 254 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 OR5V1Q9UGF6 321 aa9.06□□□□□ -0.96
TPM1-229ENST00000561242 A0A1W2PPH5 198 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 OOEPA6NGQ2 149 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 OR4C45A6NMZ5 311 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 PRR32B1ATL7 298 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 H3BUI4 141 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 OGG1O15527 345 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 NDUFB3O43676 98 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 SULT1B1O43704 296 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 SRSF10O75494 262 aaKnown RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 ARL6IP5O75915 188 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 PLATP00750 562 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 MT-ND2P03891 347 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 MUC1P15941 1255 aaPredicted RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 ACKR3P25106 362 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 AZGP1P25311 298 aaKnown RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 KIR3DL2P43630 455 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 PSMD7P51665 324 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 BMXP51813 675 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 SLC35A2P78381 396 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 MAB21L1Q13394 359 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 GPR176Q14439 515 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 LRRC10Q5BKY1 277 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 SFRP4Q6FHJ7 346 aaPredicted RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 UTS2BQ765I0 119 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 ZFP41Q8N8Y5 198 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 SCCPDHQ8NBX0 429 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 DNAAF1Q8NEP3 725 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 OR13C9Q8NGT0 318 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 Q8TCH9 128 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 RPL3LQ92901 407 aaKnown RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 TMEM106AQ96A25 262 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 ITPKCQ96DU7 683 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 NR1H4Q96RI1 486 aaPredicted RBP9.05□□□□□ -0.96
TPM1-229ENST00000561242 TMED9Q9BVK6 235 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 DUSP21Q9H596 190 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 ZNF665Q9H7R5 613 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 ISYNA1Q9NPH2 558 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 TMEM138Q9NPI0 162 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 LRCH1Q9Y2L9 728 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 GSTK1Q9Y2Q3 226 aa9.05□□□□□ -0.96
TPM1-229ENST00000561242 A0A1B0GTI1 187 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 C5orf63A6NC05 138 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 J3QT63 122 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 PDCD5O14737 125 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 ADAM20O43506 726 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 PLPP2O43688 288 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 LILRA1O75019 489 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 INMTO95050 263 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 ZNF205O95201 554 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 MYL9P24844 172 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 BDKRB2P30411 391 aa9.04□□□□□ -0.96
TPM1-229ENST00000561242 SRP14P37108 136 aaKnown RBP9.04□□□□□ -0.96
TPM1-229ENST00000561242 TGFBR2P37173 567 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms