RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 FBLIM1Q8WUP2 373 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 RPL3LQ92901 407 aaKnown RBP12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 DACT3Q96B18 629 aaPredicted RBP12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 JAM3Q9BX67 310 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 TMPRSS13Q9BYE2 586 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 OR51I2Q9H344 312 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 MMP26Q9NRE1 261 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 FRRS1LQ9P0K9 344 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 MIOXQ9UGB7 285 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 ENPP5Q9UJA9 477 aa12.75□□□□□ -0.37
SNRPA1-213ENST00000560856 CUBNO60494 3623 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 OOEPA6NGQ2 149 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 A6NIN4 97 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 SRRM5B3KS81 715 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 C3orf80F5H4A9 247 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 J3QLW9 94 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 FOXH1O75593 365 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 FCN3O75636 299 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 NRASP01111 189 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 LIMS3P0CW19 117 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 LIMS4P0CW20 117 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 ZNF19P17023 458 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 GNG3P63215 75 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 ODF4Q2M2E3 257 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 KLHL22Q53GT1 634 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 CEP78Q5JTW2 689 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 DCDC5Q6ZRR9 648 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 MOB3CQ70IA8 216 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 THAP5Q7Z6K1 395 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 FAM90A1Q86YD7 464 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 SYS1Q8N2H4 156 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 BOLLQ8N9W6 283 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 OR10Z1Q8NGY1 313 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 LRRC29Q8WV35 223 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 SEH1LQ96EE3 360 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 ISG20L2Q9H9L3 353 aaKnown RBP12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 INPP5EQ9NRR6 644 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 OPN4Q9UHM6 478 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
SNRPA1-213ENST00000560856 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 LOC107986453A0A1B0GWG9 222 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 hCG_1807616A0A1W2PRN6 198 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 OR5B21A6NL26 309 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 OR4C45A6NMZ5 311 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 ZNF732B4DXR9 585 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 E9PI62 339 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 PHF1O43189 567 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 SYT7O43581 403 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 RPS2P15880 293 aaKnown RBP12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 AMY2BP19961 511 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 PCMT1P22061 227 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 GPM6AP51674 278 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 CCR9P51686 369 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 CLVS2Q5SYC1 327 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 SETD9Q8NE22 299 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 NEIL1Q96FI4 390 aaPredicted RBP12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 GPR173Q9NS66 373 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 CTSZQ9UBR2 303 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 LRCH1Q9Y2L9 728 aa12.73□□□□□ -0.37
SNRPA1-213ENST00000560856 IGHV3OR15-7A0A075B7D8 119 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 A0A0G2JMP0 313 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 A0A0X1KG70 313 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 A0A1B0GVI7 797 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 H3BSH0 61 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 RHBDL1O75783 438 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ISG15P05161 165 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 UBCP0CG48 685 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ZNF12P17014 697 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ACTA2P62736 377 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ACTG2P63267 376 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ALKBH1Q13686 389 aaKnown RBP12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 ESCO2Q56NI9 601 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 PLCXD3Q63HM9 321 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 FAHD2BQ6P2I3 314 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 KCTD8Q6ZWB6 473 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 CCDC54Q8NEL0 328 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 OR4M2Q8NGB6 313 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 OR10AC1Q8NH08 325 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 FAHD2AQ96GK7 314 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 SSBP3Q9BWW4 388 aaPredicted RBP12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 WDR13Q9H1Z4 485 aa12.72□□□□□ -0.37
SNRPA1-213ENST00000560856 PQLC2LA1A4F0 135 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 H0YJX3 145 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 J3QLI3 93 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 NDUFA2O43678 99 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 GYPAP02724 150 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 HTR1AP08908 422 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 MUC1P15941 1255 aaPredicted RBP12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 SRD5A1P18405 259 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 HNF1AP20823 631 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 GATA3P23771 443 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 DCKP27707 260 aa12.71□□□□□ -0.37
SNRPA1-213ENST00000560856 PITPNBP48739 271 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms