RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LRRC29Q8WV35 223 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 C12orf43Q96C57 262 aaKnown RBP12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 RNF170Q96K19 258 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 FAM71F1Q96KD3 344 aaPredicted RBP12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 TBX5Q99593 518 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 ESM1Q9NQ30 184 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 CTSZQ9UBR2 303 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 AUP1Q9Y679 476 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 V9GYS6 101 aa12.62□□□□□ -0.39
SNRPA1-210ENST00000560383 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ATP6V1E1P36543 226 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 GNG3P63215 75 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ZNF85Q03923 595 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 PLEKHG7Q6ZR37 379 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 THAP5Q7Z6K1 395 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 CATSPERDQ86XM0 798 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 YIPF7Q8N8F6 280 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ZDHHC22Q8N966 263 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 SCCPDHQ8NBX0 429 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 OR5A2Q8NGI9 324 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 RORBQ92753 470 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 HIST1H2AAQ96QV6 131 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 MRI1Q9BV20 369 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 OR51I2Q9H344 312 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ZMAT3Q9HA38 289 aaKnown RBP12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ERVK-18Q9QC07 812 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 ENPP5Q9UJA9 477 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 NUP50Q9UKX7 468 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 GMPPBQ9Y5P6 360 aa12.61□□□□□ -0.39
SNRPA1-210ENST00000560383 OR5B21A6NL26 309 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 SNTNA6NMZ2 147 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 C22orf46C9J442 243 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 SLC16A6O15403 523 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 ADAM20O43506 726 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 MPZL2O60487 215 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 GYPAP02724 150 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 FAHP16930 419 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 ZSCAN26Q16670 478 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 MICBQ29980 383 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 KLF17Q5JT82 389 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 ATPAF1Q5TC12 328 aaPredicted RBP12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 BTNL3Q6UXE8 466 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 DOK3Q7L591 496 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 COMMD2Q86X83 199 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 OR14K1Q8NGZ2 314 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 RHOXF1Q8NHV9 184 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 UPRTQ96BW1 309 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 RNFT2Q96EX2 444 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 RDH12Q96NR8 316 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 SMURF1Q9HCE7 757 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 FAM118AQ9NWS6 357 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 SLC22A13Q9Y226 551 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 PIGLQ9Y2B2 252 aa12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 EXOGQ9Y2C4 368 aaKnown RBP12.6□□□□□ -0.39
SNRPA1-210ENST00000560383 LOC100130705A0A1B0GUX0 176 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 DLGAP1O14490 977 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 FCN3O75636 299 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 RPP14O95059 124 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 GPM6AP51674 278 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 ACTC1P68032 377 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 ACTA1P68133 377 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 CDONQ4KMG0 1287 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 CD276Q5ZPR3 534 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 RBMS3Q6XE24 437 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 KCTD20Q7Z5Y7 419 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 CCDC54Q8NEL0 328 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 STMN2Q93045 179 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 NUDT16L1Q9BRJ7 211 aaKnown RBP12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 GTF2A1LQ9UNN4 478 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 PCDHGB1Q9Y5G3 927 aa12.59□□□□□ -0.39
SNRPA1-210ENST00000560383 DOCK11Q5JSL3 2073 aa12.58□□□□□ -0.39
SNRPA1-210ENST00000560383 IGHV3OR15-7A0A075B7D8 119 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 ZNF732B4DXR9 585 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 P2RY10O00398 339 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 ENSAO43768 121 aaKnown RBP12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 BAG2O95816 211 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 NRASP01111 189 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 LIPFP07098 398 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 AMY2BP19961 511 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 TGM4P49221 684 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 WDR38Q5JTN6 314 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 CEP78Q5JTW2 689 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 CLVS2Q5SYC1 327 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 STUMQ69YW2 141 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 FDX2Q6P4F2 183 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 KCTD8Q6ZWB6 473 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 MOB3CQ70IA8 216 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 EGFL6Q8IUX8 553 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 PRSS35Q8N3Z0 413 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 ACBD7Q8N6N7 88 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 SGMS2Q8NHU3 365 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 AQP3Q92482 292 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 LGALS12Q96DT0 336 aa12.58□□□□□ -0.4
SNRPA1-210ENST00000560383 SEH1LQ96EE3 360 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms