RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TMEM212A6NML5 194 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 H3BSH0 61 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 ZFPL1O95159 310 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 LALBAP00709 142 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 LHBP01229 141 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 CCDC159P0C7I6 412 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 IRF2P14316 349 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 MDH2P40926 338 aaKnown RBP14.12□□□□□ -0.15
RPL28-209ENST00000560055 GTF2A1P52655 376 aaPredicted RBP14.12□□□□□ -0.15
RPL28-209ENST00000560055 CDH15P55291 814 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 GNG3P63215 75 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 SLC35A2P78381 396 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 HOXA4Q00056 320 aaPredicted RBP14.12□□□□□ -0.15
RPL28-209ENST00000560055 MED21Q13503 144 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 FAM201AQ5SY85 155 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 RNLSQ5VYX0 342 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 PLCXD3Q63HM9 321 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 CYB5R2Q6BCY4 276 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 OR5A2Q8NGI9 324 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 OR51A4Q8NGJ6 313 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 OR10AC1Q8NH08 325 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 HIST1H2AAQ96QV6 131 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 GAL3ST1Q99999 423 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 CHST5Q9GZS9 411 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 PLEKHA1Q9HB21 404 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 TMEM165Q9HC07 324 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 PAK1IP1Q9NWT1 392 aaPredicted RBP14.12□□□□□ -0.15
RPL28-209ENST00000560055 CHCHD3Q9NX63 227 aaKnown RBP14.12□□□□□ -0.15
RPL28-209ENST00000560055 BABAM2Q9NXR7 383 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 HHLA2Q9UM44 414 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 PCDHGB5Q9Y5G0 923 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 JMJD1CQ15652 2540 aa14.12□□□□□ -0.15
RPL28-209ENST00000560055 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 ISPDA4D126 451 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 ANKRD61A6NGH8 418 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 FAM157AC9JC47 383 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 PPIAL4DF5H284 164 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 ZNF205O95201 554 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 CDK1P06493 297 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 GPM6AP51674 278 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 CDK5R1Q15078 307 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 ZNF404Q494X3 552 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 DMRTC1Q5HYR2 192 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 RPL22L1Q6P5R6 122 aaKnown RBP14.11□□□□□ -0.15
RPL28-209ENST00000560055 WDR82Q6UXN9 313 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 MOB3CQ70IA8 216 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 STX19Q8N4C7 294 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 SPICQ8N5J4 248 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 GCSAMQ8N6F7 178 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 GATAD2BQ8WXI9 593 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 SGCDQ92629 289 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 PDCD1LG2Q9BQ51 273 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 OR51I2Q9H344 312 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 DUSP21Q9H596 190 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 GPR173Q9NS66 373 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 PPIAL4AQ9Y536 164 aa14.11□□□□□ -0.15
RPL28-209ENST00000560055 SIRT4Q9Y6E7 314 aaPredicted RBP14.11□□□□□ -0.15
RPL28-209ENST00000560055 TRBV2A0A0J9YWF9 115 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 ZNF732B4DXR9 585 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 F5H0A9 414 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 CDIPTO14735 213 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 OGG1O15527 345 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 RPSAP08865 295 aaKnown RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 ZNF16P17020 682 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 CRHBPP24387 322 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 DOC2BQ14184 412 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 UBE2V2Q15819 145 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 MUC20Q8N307 709 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 ZNF676Q8N7Q3 588 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 LINC01356Q8N9X3 169 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 SCCPDHQ8NBX0 429 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 OR5AK2Q8NH90 309 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 RGP1Q92546 391 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 RPL3LQ92901 407 aaKnown RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 RAB39BQ96DA2 213 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 ADAT3Q96EY9 351 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 CNBD2Q96M20 576 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 CDCA4Q9BXL8 241 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 METTL17Q9H7H0 456 aaPredicted RBP14.1□□□□□ -0.15
RPL28-209ENST00000560055 SCN3BQ9NY72 215 aa14.1□□□□□ -0.15
RPL28-209ENST00000560055 CUBNO60494 3623 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 hCG_1807616A0A1W2PRN6 198 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 PQLC2LA1A4F0 135 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 CEACAM18A8MTB9 384 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 PTGES3LE9PB15 166 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.09□□□□□ -0.15
RPL28-209ENST00000560055 GATBO75879 557 aaKnown RBP14.09□□□□□ -0.15
RPL28-209ENST00000560055 EGR1P18146 543 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 DMKNQ6E0U4 476 aaPredicted RBP14.09□□□□□ -0.15
RPL28-209ENST00000560055 KCTD8Q6ZWB6 473 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 UTS2BQ765I0 119 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 NANOGP1Q8N7R0 232 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 OR10Z1Q8NGY1 313 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 LRRC29Q8WV35 223 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 PP6455Q8WZ26 134 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 TECTBQ96PL2 329 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 TMEM246Q9BRR3 403 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 COMMD4Q9H0A8 199 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms