RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 FOXB1Q99853 325 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 ZNF703Q9H7S9 590 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 ABI3Q9P2A4 366 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 B4GALT7Q9UBV7 327 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 UBQLN2Q9UHD9 624 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 DHRS7CA6NNS2 312 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 C1QTNF9BB2RNN3 333 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 HLA-AP01891 365 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 IFNA6P05013 189 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 C1QTNF9P0C862 333 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 FCGR2AP12318 317 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 DCAF10Q5QP82 559 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 CLVS2Q5SYC1 327 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 C1QL2Q7Z5L3 287 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 SEMA6DQ8NFY4 1073 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 OR51T1Q8NGJ9 327 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 OR4K15Q8NH41 348 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 ADAMTS17Q8TE56 1095 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 ARHGAP5-AS1Q96IT6 56 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 CITED4Q96RK1 184 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 GPR35Q9HC97 309 aa12.63□□□□□ -0.39
RABGGTA-212ENST00000559974 LOC100509620A0A075B734 347 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 NKX2-8O15522 239 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 RAD51DO75771 328 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 PMP2P02689 132 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 HPNP05981 417 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 MGMTP16455 207 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 ITGA3P26006 1051 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 CD82P27701 267 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 CD34P28906 385 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 HGFACQ04756 655 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 RIPPLY1Q0D2K3 151 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 GK2Q14410 553 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 KRTAP27-1Q3LI81 207 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 ACTBL2Q562R1 376 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 LY6G6FQ5SQ64 297 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 PIGTQ969N2 578 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 TMEM45BQ96B21 275 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 REEP6Q96HR9 211 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 S100A13Q99584 98 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 MAB21L2Q9Y586 359 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 ITPR1Q14643 2758 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 FREM1Q5H8C1 2179 aa12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 URB1O60287 2271 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-212ENST00000559974 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR6C65A6NJZ3 312 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR2AT4A6NND4 320 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ARPC5O15511 151 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 CFDP00746 253 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ZBTB25P24278 435 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 CBX5P45973 191 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 HTR5AP47898 357 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 GMFBP60983 142 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 PCBD1P61457 104 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR1C1Q15619 314 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 LPCAT3Q6P1A2 487 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 LYG2Q86SG7 212 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR5M8Q8NGP6 311 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR2AE1Q8NHA4 323 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OCSTAMPQ9BR26 566 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 DNAJC13O75165 2243 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FXYD6-FXYD2A0A087WZ82 144 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 KLK10O43240 276 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 IL2RAP01589 272 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 LCATP04180 440 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 PATE4P0C8F1 98 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 SERPINA2P20848 420 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ACKR3P25106 362 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 RFC3P40938 356 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR3A3P47888 321 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 LHX2P50458 406 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 PSG4Q00888 419 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ARFRP1Q13795 201 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 MICBQ29980 383 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 VAX1Q5SQQ9 334 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FAHD2BQ6P2I3 314 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FAHD2AQ96GK7 314 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 TM2D1Q9BX74 207 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 HES7Q9BYE0 225 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FAM117AQ9C073 453 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 OR2H1Q9GZK4 316 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 FXYD6Q9H0Q3 95 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 GPR173Q9NS66 373 aa12.61□□□□□ -0.39
RABGGTA-212ENST00000559974 ZNF407Q9C0G0 2248 aa12.6□□□□□ -0.39
RABGGTA-212ENST00000559974 IGKV3D-15A0A087WSY6 115 aa12.6□□□□□ -0.39
RABGGTA-212ENST00000559974 RPS10-NUDT3A0A1W2PQS6 291 aa12.6□□□□□ -0.39
RABGGTA-212ENST00000559974 CELA3AP09093 270 aa12.6□□□□□ -0.39
RABGGTA-212ENST00000559974 S100A11P31949 105 aa12.6□□□□□ -0.39
RABGGTA-212ENST00000559974 EIF2S3P41091 472 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms