RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SCN2BO60939 215 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 NDUFS6O75380 124 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 DHRS3O75911 302 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 VAMP5O95183 116 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 RCBTB2O95199 551 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TRBV12-3P01733 135 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 APCSP02743 223 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 MT-ND4P03905 459 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF688P0C7X2 276 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TLX1NBP0CAT3 122 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PET100P0DJ07 73 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PSG2P11465 335 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 CXCR1P25024 350 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 LOXP28300 417 aaPredicted RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 MAGEA3P43357 314 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 XKP51811 444 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 GFERP55789 205 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 RAB25P57735 213 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TAS2R31P59538 309 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 CKAP4Q07065 602 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PNOCQ13519 176 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PIGHQ14442 188 aaPredicted RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 DMC1Q14565 340 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PMVKQ15126 192 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 GUSBP1Q15486 140 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 MAPRE2Q15555 327 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TRAM1Q15629 374 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 DEFB116Q30KQ4 102 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 BSXQ3C1V8 233 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TTC32Q5I0X7 151 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 MFSD14CQ5VZR4 134 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TMEM236Q5W0B7 351 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SAXO2Q658L1 398 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 STEAP4Q687X5 459 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 NANOGP8Q6NSW7 305 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TIFABQ6ZNK6 161 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 LINC01551Q86U37 167 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SPATA24Q86W54 205 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TMEM256Q8N2U0 113 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 CCNYL1Q8N7R7 359 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 OR4M1Q8NGD0 313 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SFXN5Q8TD22 340 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 DDI1Q8WTU0 396 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 C15orf40Q8WUR7 153 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SNF8Q96H20 258 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 KCNS1Q96KK3 526 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 OR4K3Q96R72 315 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 METTL26Q96S19 204 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 RBBP8Q99708 897 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 CTRCQ99895 268 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 C7orf50Q9BRJ6 194 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 LLPHQ9BRT6 129 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 NDFIP1Q9BT67 221 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 GGTLC1Q9BX51 225 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PORCNQ9H237 461 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 OR52D1Q9H346 318 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TPK1Q9H3S4 243 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 C12orf10Q9HB07 376 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 ABCB9Q9NP78 766 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 EXOSC4Q9NPD3 245 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PRR34Q9NV39 138 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 NLE1Q9NVX2 485 aaPredicted RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 ZNRD1Q9P1U0 126 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 ENOPH1Q9UHY7 261 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 VAX2Q9UIW0 290 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 ANXA10Q9UJ72 324 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SLC7A11Q9UPY5 501 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PSG11Q9UQ72 335 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 C15orf41Q9Y2V0 281 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 PPIL1Q9Y3C6 166 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 LRPPRCP42704 1394 aaKnown RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 TMEM94Q12767 1356 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 CARMIL3Q8ND23 1372 aa1.55□□□□□ -2.16
GABPB1-209ENST00000559100 NPHP4O75161 1426 aaPredicted RBP1.55□□□□□ -2.16
GABPB1-209ENST00000559100 SCN2AQ99250 2005 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 ATRXP46100 2492 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 A0A096LNJ9 63 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 IGHV1OR15-9A0A0B4J2B8 117 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 C1orf232A0A0U1RR37 186 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 A0A1B0GVX0 72 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 WI2-2373I1.2A0A1W2PRP0 233 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 C5orf63A6NC05 138 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 OR5H1A6NKK0 313 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 RSPH10B2B2RC85 870 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 F8VP50 259 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 RNASEK-C17orf49H0YIS7 233 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 GOLGA8RI6L899 631 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 PLPP3O14495 311 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 TOR1AO14656 332 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 TAAR5O14804 337 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 PSPHP1O15172 72 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 NDUFS5O43920 106 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 CCDC22O60826 627 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 MED6O75586 246 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 MYO1DO94832 1006 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 CDK14O94921 469 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 RLN2P04090 185 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 ADRA2AP08913 450 aa1.54□□□□□ -2.16
GABPB1-209ENST00000559100 RSPH10BP0C881 870 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms