RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 PPP1R14AQ96A00 147 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 DCTN5Q9BTE1 182 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 DNTTIP1Q9H147 329 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 NIPAL2Q9H841 368 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 ZNF556Q9HAH1 456 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 ONECUT1Q9UBC0 465 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 DNAJB9Q9UBS3 223 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 ZNF391Q9UJN7 358 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 LRP12Q9Y561 859 aa9.46□□□□□ -0.9
CASC4-205ENST00000558735 TCRBV3S1A0A5B6 114 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 ACOD1A6NK06 481 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 RNASEK-C17orf49H0YIS7 233 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 PSMD9O00233 223 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 GPR137BO60478 399 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 E2F6O75461 281 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 RHBDL1O75783 438 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 ACAA1P09110 424 aaPredicted RBP9.45□□□□□ -0.9
CASC4-205ENST00000558735 HOXB6P17509 224 aaKnown RBP9.45□□□□□ -0.9
CASC4-205ENST00000558735 MAP2K3P46734 347 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 PSMA6P60900 246 aaKnown RBP9.45□□□□□ -0.9
CASC4-205ENST00000558735 RPS7P62081 194 aaKnown RBP9.45□□□□□ -0.9
CASC4-205ENST00000558735 CBX1P83916 185 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 DGUOKQ16854 277 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 LRRC10Q5BKY1 277 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 C1orf122Q6ZSJ8 110 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 KCTD8Q6ZWB6 473 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 KRT77Q7Z794 578 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SPATA24Q86W54 205 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 LDLRAD3Q86YD5 345 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 LINC01006Q8NI28 216 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SLC7A6OSQ96CW6 309 aaPredicted RBP9.45□□□□□ -0.9
CASC4-205ENST00000558735 MED30Q96HR3 178 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 YIPF3Q9GZM5 350 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SEMA6AQ9H2E6 1030 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 OR51I2Q9H344 312 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 SIRT7Q9NRC8 400 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 TVP23BQ9NYZ1 205 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 DNAJB11Q9UBS4 358 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 LAMP5Q9UJQ1 280 aa9.45□□□□□ -0.9
CASC4-205ENST00000558735 A0A0U1RQV5 110 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 TMEM269A0A1B0GVZ9 245 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 CCDC182A6NF36 153 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 PRR32B1ATL7 298 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 ZNF732B4DXR9 585 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 TIMM23O14925 209 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 FKBP6O75344 327 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 DAPP51397 102 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 GPM6AP51674 278 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 CRISP1P54107 249 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 RPL15P61313 204 aaKnown RBP9.44□□□□□ -0.9
CASC4-205ENST00000558735 TAF9Q16594 264 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 DEGS2Q6QHC5 323 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 TRPM8Q7Z2W7 1104 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 ZDHHC23Q8IYP9 409 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 CMTM4Q8IZR5 234 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 OR5A2Q8NGI9 324 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 NPRL2Q8WTW4 380 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
CASC4-205ENST00000558735 HIST1H2AAQ96QV6 131 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 ABCB9Q9NP78 766 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 FAM206AQ9NX38 181 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 SLC25A10Q9UBX3 287 aaPredicted RBP9.44□□□□□ -0.9
CASC4-205ENST00000558735 POMPQ9Y244 141 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 FAM96BQ9Y3D0 163 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 RNF114Q9Y508 228 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 MAB21L2Q9Y586 359 aa9.44□□□□□ -0.9
CASC4-205ENST00000558735 IGKV1D-17A0A075B6S4 117 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 ZNF816-ZNF321PA0A0X1KG74 233 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 A0A1W2PRD5 423 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 A0A1W2PRF3 423 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 A0A1W2PRM7 423 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 OR2AT4A6NND4 320 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 SIGLEC5O15389 551 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 GYG2O15488 501 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 IGLV3-1P01715 115 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 MRPL3P09001 348 aaKnown RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 PSG2P11465 335 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 GLRA1P23415 457 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 GABRA2P47869 451 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 CAV3P56539 151 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 GNG3P63215 75 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 EFNB1P98172 346 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 ROM1Q03395 351 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 KLRD1Q13241 179 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 FLOT2Q14254 428 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 PTGES3Q15185 160 aaKnown RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 CEACAM21Q3KPI0 293 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 CEP78Q5JTW2 689 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 FAHD1Q6P587 224 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 KCTD18Q6PI47 426 aaPredicted RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 C17orf107Q6ZR85 190 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 MOB3CQ70IA8 216 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 BCDIN3DQ7Z5W3 292 aaKnown RBP9.43□□□□□ -0.9
CASC4-205ENST00000558735 ZNF679Q8IYX0 411 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 PNKDQ8N490 385 aa9.43□□□□□ -0.9
CASC4-205ENST00000558735 ZSCAN4Q8NAM6 433 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms