RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NPY4RP50391 375 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 CAPZA1P52907 286 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 ARF1P84077 181 aaKnown RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 ZNF92Q03936 586 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 SCRN3Q0VDG4 424 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PABPC1L2AQ5JQF8 200 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 CPEB3Q8NE35 698 aaKnown RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 FBXW5Q969U6 566 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
TPM1-210ENST00000558264 ABI3Q9P2A4 366 aa9.2□□□□□ -0.94
TPM1-210ENST00000558264 PLSCR5A0PG75 271 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 ZNF503-AS2A6NEH8 195 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 MTRF1O75570 445 aaKnown RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 ALX3O95076 343 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 HPNP05981 417 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 RPS27AP62979 156 aaKnown RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 PMP22Q01453 160 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 AIMP2Q13155 320 aaKnown RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 MEF2DQ14814 521 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 LY6G6FQ5SQ64 297 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 DRAM2Q6UX65 266 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 KCTD9Q7L273 389 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OR2W3Q7Z3T1 314 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OR52H1Q8NGJ2 320 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 CCDC107Q8WV48 283 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 ST8SIA4Q92187 359 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 DYRK2Q92630 601 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 CDC6Q99741 560 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 URM1Q9BTM9 101 aaKnown RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 CLEC4MQ9H2X3 399 aaPredicted RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 C12orf49Q9H741 205 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 ZNF701Q9NV72 531 aaPredicted RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 PTTG3PQ9NZH4 202 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 PLEKHA6Q9Y2H5 1048 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OTOGLQ3ZCN5 2332 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 BOD1L1Q8NFC6 3051 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OR6C6A6NF89 314 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 MFNGO00587 321 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 ZNF205O95201 554 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 CHRM2P08172 466 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 CD34P28906 385 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OPCMLQ14982 345 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 ATXN7L3Q14CW9 347 aaPredicted RBP9.19□□□□□ -0.94
TPM1-210ENST00000558264 FAM219AQ8IW50 185 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 OR56B1Q8NGI3 324 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 PP6455Q8WZ26 134 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 HAS2Q92819 552 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 PRRT1Q99946 306 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 PARD6AQ9NPB6 346 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 TIMM10BQ9Y5J6 103 aa9.19□□□□□ -0.94
TPM1-210ENST00000558264 PPP3CBP16298 524 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 AMY2BP19961 511 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 NFYAP23511 347 aaPredicted RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 PPIAP62937 165 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 EIF3IQ13347 325 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 TAF9Q16594 264 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 JMJD6Q6NYC1 403 aaPredicted RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 OR51B6Q9H340 312 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 FBLN5Q9UBX5 448 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 MCRIP1C9JLW8 97 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 H3BUI4 141 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 SYNGR4O95473 234 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 SP1P08047 785 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 NAT2P11245 290 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 EDN3P14138 238 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 RIPPLY1Q0D2K3 151 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 PDSS1Q5T2R2 415 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 PIGCQ92535 297 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 PECRQ9BY49 303 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 B3GNT2Q9NY97 397 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 IGKV1D-8A0A087WSZ0 117 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 FAM221AA4D161 298 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 KCNAB3O43448 404 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 APOC1P02654 83 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 CD79AP11912 226 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 ZNF708P17019 499 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 GSK3AP49840 483 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 SNU13P55769 128 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 SEC61A1P61619 476 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 IL13RA1P78552 427 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 RNFT1Q5M7Z0 435 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 NUFIP2Q7Z417 695 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 CDH26Q8IXH8 852 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 CSNK2A3Q8NEV1 391 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 ARL6Q9H0F7 186 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
TPM1-210ENST00000558264 MCTS1Q9ULC4 181 aaKnown RBP9.18□□□□□ -0.94
TPM1-210ENST00000558264 POM121CA8CG34 1229 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 TEX46H3BTG2 121 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 NKX2-8O15522 239 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 SCGNO76038 276 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 FARS2O95363 451 aaKnown RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 GSTP1P09211 210 aaKnown RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 MMP7P09237 267 aaPredicted RBP9.17□□□□□ -0.94
TPM1-210ENST00000558264 FAM3AP98173 230 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 RSU1Q15404 277 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 PIGYQ3MUY2 71 aa9.17□□□□□ -0.94
TPM1-210ENST00000558264 BEX5Q5H9J7 111 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms