RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 UBE2V2Q15819 145 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 CEP78Q5JTW2 689 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 FAM27D1Q5T7N8 215 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 C20orf204Q6ZNR8 217 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 LINC00299Q6ZSB3 139 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 LRRTM1Q86UE6 522 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 MKXQ8IYA7 352 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 SAXO1Q8IYX7 474 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 OR5AS1Q8N127 324 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 MUC15Q8N387 334 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 JAGN1Q8N5M9 183 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 ZNF611Q8N823 705 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 ZSCAN4Q8NAM6 433 aaPredicted RBP10.6□□□□□ -0.71
TPM1-209ENST00000558072 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 DYNC2LI1Q8TCX1 351 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 OR5P3Q8WZ94 311 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 POM121Q96HA1 1249 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 CMTM3Q96MX0 182 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 SOX7Q9BT81 388 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 MRPL37Q9BZE1 423 aaKnown RBP10.6□□□□□ -0.71
TPM1-209ENST00000558072 DYNLRB1Q9NP97 96 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 GPR173Q9NS66 373 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 ADAM30Q9UKF2 790 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 POLDIP2Q9Y2S7 368 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 CADP27708 2225 aa10.6□□□□□ -0.71
TPM1-209ENST00000558072 TRAV8-7A0A075B6U6 113 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 A0A1W2PPR1 153 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 FAM221AA4D161 298 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 LRP5LA4QPB2 252 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 IFITM5A6NNB3 132 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 SLC17A2O00624 439 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 BPNT1O95861 308 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 CALCBP10092 127 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 TNFRSF1AP19438 455 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 LOXP28300 417 aaPredicted RBP10.59□□□□□ -0.71
TPM1-209ENST00000558072 HTR2CP28335 458 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 MAGEB1P43366 347 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 MMP15P51511 669 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 HNRNPA0Q13151 305 aaKnown RBP10.59□□□□□ -0.71
TPM1-209ENST00000558072 SPCS2Q15005 226 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 KISS1Q15726 138 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 RAB11BQ15907 218 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 C1orf100Q5SVJ3 147 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 Q8IYB0 196 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 ZNF671Q8TAW3 534 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 NDNFQ8TB73 568 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 ITPKCQ96DU7 683 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 SYT3Q9BQG1 590 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 PKIBQ9C010 78 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 PPIL3Q9H2H8 161 aaKnown RBP10.59□□□□□ -0.71
TPM1-209ENST00000558072 MMP27Q9H306 513 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 CBLN4Q9NTU7 201 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 IL19Q9UHD0 177 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 STEAP1Q9UHE8 339 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
TPM1-209ENST00000558072 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
TPM1-209ENST00000558072 A0A075B6Q4 140 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 FAM230AA0A1W2PPH8 454 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 PQLC2LA1A4F0 135 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 A6NIN4 97 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 C17orf100A8MU93 164 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 ZNF732B4DXR9 585 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 LMX1BO60663 402 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 SCGNO76038 276 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 CD55P08174 381 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 S100A5P33763 92 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 CD200P41217 278 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 ALDH3B1P43353 468 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 PPOXP50336 477 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 TESK1Q15569 626 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 CNPY1Q3B7I2 92 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 ZNF404Q494X3 552 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 FAM76BQ5HYJ3 339 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 FOXB2Q5VYV0 432 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 HPS1Q92902 700 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 PTX4Q96A99 478 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 C14orf79Q96F83 325 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 ELMOD3Q96FG2 381 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 PSMG3-AS1Q96PY0 264 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 RAB1BQ9H0U4 201 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 CST11Q9H112 138 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 RNF167Q9H6Y7 350 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 DECR2Q9NUI1 292 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 RABL2AQ9UBK7 228 aaPredicted RBP10.58□□□□□ -0.72
TPM1-209ENST00000558072 FZR1Q9UM11 496 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
TPM1-209ENST00000558072 UTP20O75691 2785 aaKnown RBP10.58□□□□□ -0.72
TPM1-209ENST00000558072 IGKV1-9A0A0C4DH69 117 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 CTAG2O75638 210 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 ACAA1P09110 424 aaPredicted RBP10.57□□□□□ -0.72
TPM1-209ENST00000558072 TMEM225BP0DP42 221 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 SSTR2P30874 369 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 PTGFRP43088 359 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 MSMPQ1L6U9 139 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 IDNKQ5T6J7 187 aa10.57□□□□□ -0.72
TPM1-209ENST00000558072 OR2W3Q7Z3T1 314 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms