RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 GOLGA8HP0CJ92 632 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 FOLR1P15328 257 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ZP3P21754 424 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 RFC3P40938 356 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ATP6V0D1P61421 351 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC25A11Q02978 314 aaKnown RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 EGFEM1PQ0D2K5 195 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 RPEL1Q2QD12 228 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 CGB2Q6NT52 195 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 IGFL3Q6UXB1 125 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 STRADAQ7RTN6 431 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 THOC6Q86W42 341 aaKnown RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ARIH2OSQ8N7S6 290 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 FAM131CQ96AQ9 280 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 SIGLEC12Q96PQ1 595 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 KCNS3Q9BQ31 491 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 CHID1Q9BWS9 393 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 OSBPL10Q9BXB5 764 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 TMEM38AQ9H6F2 299 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 RANBP3Q9H6Z4 567 aaPredicted RBP3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 KCNJ16Q9NPI9 418 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 AIG1Q9NVV5 245 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 CD274Q9NZQ7 290 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 CHMP5Q9NZZ3 219 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 ASF1AQ9Y294 204 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 TRPM6Q9BX84 2022 aa3.63□□□□□ -1.83
MTHFD1-216ENST00000557539 A0A087WWV3 80 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 IGKV1D-13A0A0B4J2D9 117 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 A0A0G2JLM5 398 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 TSPAN11A1L157 253 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 RAB19A4D1S5 217 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 OR6C74A6NCV1 312 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF726A6NNF4 738 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 CENPXA8MT69 81 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 A8MUA0 341 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 SRRM5B3KS81 715 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 FKBP6O75344 327 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 HBE1P02100 147 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 IGKV1-13P0DP09 117 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ATF6P18850 670 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 SLC26A3P40879 764 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 CCR8P51685 355 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ATP5J2P56134 94 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 DLX1P56177 255 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 XRCC4Q13426 336 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 KRT71Q3SY84 523 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 C14orf177Q52M58 125 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 MARC1Q5VT66 337 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ADNP2Q6IQ32 1131 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ST13P4Q8IZP2 240 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 GATSQ8NAP1 163 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ZNF740Q8NDX6 193 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 OR2AP1Q8NGE2 309 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 CPB2Q96IY4 423 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 ARHGDIGQ99819 225 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 DMAP1Q9NPF5 467 aaPredicted RBP3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 CTPS2Q9NRF8 586 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 RBMX2Q9Y388 322 aaKnown RBP3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 GMEB1Q9Y692 573 aa3.62□□□□□ -1.83
MTHFD1-216ENST00000557539 DNAH7Q8WXX0 4024 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 PRR14LQ5THK1 2151 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 ERICH2A1L162 156 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SMKR1H3BMG3 65 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CETN3O15182 167 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 XRCC2O43543 280 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CALM1P0DP23 149 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CALM2P0DP24 149 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CALM3P0DP25 149 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 HMGA1P17096 107 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 COX7A1P24310 79 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SERPINB5P36952 375 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 TUFMP49411 452 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 P2RY4P51582 365 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 TAS2R19P59542 299 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 ARFRP1Q13795 201 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CLINT1Q14677 625 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 Q1RN00 199 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CEP85LQ5SZL2 805 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SNX20Q7Z614 316 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 TMEM25Q86YD3 366 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 RBM45Q8IUH3 476 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 NKAPP1Q8N9T2 125 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 KLHL30-AS1Q8NEE0 82 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 OR10R2Q8NGX6 335 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 OR51F2Q8NH61 342 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CACNG8Q8WXS5 425 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 PIK3IP1Q96FE7 263 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SERPINB12Q96P63 405 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 TSSK3Q96PN8 268 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SMIM14Q96QK8 99 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CXCL16Q9H2A7 254 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 SRMSQ9H3Y6 488 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 RDH14Q9HBH5 336 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 PLGRKTQ9HBL7 147 aa3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 MRM3Q9HC36 420 aaKnown RBP3.61□□□□□ -1.83
MTHFD1-216ENST00000557539 CLN6Q9NWW5 311 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms