RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TMEM200BQ69YZ2 307 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 DLEU7Q6UYE1 221 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 LCNL1Q6ZST4 164 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 LRRC75AQ8NAA5 344 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 Q8TCH9 128 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 TMEM239Q8WW34 195 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 MED30Q96HR3 178 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 CEP19Q96LK0 163 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 ZNF582Q96NG8 517 aaPredicted RBP4.81□□□□□ -1.64
VPS33B-207ENST00000557470 AIFM2Q9BRQ8 373 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 SEMA6AQ9H2E6 1030 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 DPAGT1Q9H3H5 408 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 ARL8BQ9NVJ2 186 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 HAO2Q9NYQ3 351 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 CCDC167Q9P0B6 97 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 VPREB3Q9UKI3 123 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
VPS33B-207ENST00000557470 TRAV27A0A087WT01 109 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 A0A1B0GWJ7 208 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 TMEM120BA0PK00 339 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ELOVL7A1L3X0 281 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 BTBD17A6NE02 478 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 A6NIZ1 184 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FAM90A8PA6NJQ4 464 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 IQCF6A8MYZ5 107 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FBP2O00757 339 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 OR10H3O60404 316 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FCN3O75636 299 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 OR5F1O95221 314 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ATP6V1G2O95670 118 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 PAHP00439 452 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 LIPFP07098 398 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FAM90A13PP0C7W8 464 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FAM90A24PP0C7X0 464 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 LYL1P12980 280 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 IRF2P14316 349 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FPR3P25089 353 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 GABRA5P31644 462 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 RGS6P49758 472 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ETV1P50549 477 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 F2RL1P55085 397 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 TAS2R41P59536 307 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 RAP1BP61224 184 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 B2MP61769 119 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ARF6P62330 175 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 RAP1AP62834 184 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 BNIP1Q12981 228 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 MAB21L1Q13394 359 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 AQP6Q13520 282 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FHL1Q13642 323 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 KIR3DS1Q14943 382 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 HERPUD1Q15011 391 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 MPPED2Q15777 294 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 AARDQ4LEZ3 155 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 VAX1Q5SQQ9 334 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 PRAMEF6Q5VXH4 476 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 SFRP4Q6FHJ7 346 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-207ENST00000557470 EPGNQ6UW88 154 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 Q6ZTK2 550 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 VMO1Q7Z5L0 202 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 DHDDSQ86SQ9 333 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 PATL1Q86TB9 770 aaKnown RBP4.8□□□□□ -1.64
VPS33B-207ENST00000557470 CROCCP3Q8IVE0 287 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 TIGD4Q8IY51 512 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 MICU2Q8IYU8 434 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 C11orf44Q8N8P7 122 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 DTX3Q8N9I9 347 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 PNLDC1Q8NA58 520 aaKnown RBP4.8□□□□□ -1.64
VPS33B-207ENST00000557470 OR52M1Q8NGK5 317 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 OR11L1Q8NGX0 322 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 OR1F12Q8NHA8 337 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FNDC8Q8TC99 324 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 SLC26A7Q8TE54 656 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 NPIPB3Q92617 1050 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 SGCDQ92629 289 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 RASD2Q96D21 266 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 C5orf30Q96GV9 206 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ECSITQ9BQ95 431 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 EBF4Q9BQW3 602 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 WACQ9BTA9 647 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 TOR3AQ9H497 397 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 WDR76Q9H967 626 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 UFSP2Q9NUQ7 469 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 NECAP2Q9NVZ3 263 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 AURKAIP1Q9NWT8 199 aaPredicted RBP4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ZNRD1Q9P1U0 126 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ERVK-18Q9QC07 812 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 RIMS3Q9UJD0 308 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FOXJ3Q9UPW0 622 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 SIGLEC9Q9Y336 463 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 MED31Q9Y3C7 131 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 FAM96BQ9Y3D0 163 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 USH1CQ9Y6N9 552 aa4.8□□□□□ -1.64
VPS33B-207ENST00000557470 ANKRD65E5RJM6 399 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 LGALS8O00214 317 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 RER1O15258 196 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 FBP1P09467 338 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 IFI30P13284 250 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 CTLA4P16410 223 aa4.79□□□□□ -1.64
VPS33B-207ENST00000557470 M6PRP20645 277 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms