RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 GPR84Q9NQS5 396 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 FBLN5Q9UBX5 448 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ALPK2Q86TB3 2170 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 METTL21EPA6NDL7 271 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 GGT3PA6NGU5 568 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SULT1C2O00338 296 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 DOK2O60496 412 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ATG12O94817 140 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 IGLV3-1P01715 115 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CD8AP01732 235 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 IGHG3P01860 377 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CRYGSP22914 178 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 THBS4P35443 961 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 EIF2S3P41091 472 aaKnown RBP11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ID4P47928 161 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CLDN12P56749 244 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 GUCA2BQ16661 112 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 DHRS7BQ6IAN0 325 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ASPHD2Q6ICH7 369 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC16A14Q7RTX9 510 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 PRSS45Q7RTY3 260 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC36A1Q7Z2H8 476 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 JAGN1Q8N5M9 183 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR51D1Q8NGF3 324 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR1F12Q8NHA8 337 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC25A28Q96A46 364 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 FBXO17Q96EF6 278 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 MFFQ9GZY8 342 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 DLL3Q9NYJ7 618 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 F5H5K5 113 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 SYNGR3O43761 229 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 DHRS3O75911 302 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 PTH2RP49190 550 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 GSK3AP49840 483 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 TAS2R20P59543 309 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 SPOCK1Q08629 439 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 C2orf76Q3KRA6 126 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 ALKAL2Q6UX46 152 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 KCNRGQ8N5I3 272 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 LINC00469Q8N7U9 141 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 PNLDC1Q8NA58 520 aaKnown RBP11.07□□□□□ -0.64
SHMT2-229ENST00000557348 FDCSPQ8NFU4 85 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
SHMT2-229ENST00000557348 SLC25A21Q9BQT8 299 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-229ENST00000557348 NUDT16L1Q9BRJ7 211 aaKnown RBP11.07□□□□□ -0.64
SHMT2-229ENST00000557348 COA4Q9NYJ1 87 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 GHRLQ9UBU3 117 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 CARHSP1Q9Y2V2 147 aaKnown RBP11.07□□□□□ -0.64
SHMT2-229ENST00000557348 V9GYS6 101 aa11.07□□□□□ -0.64
SHMT2-229ENST00000557348 H3BSH0 61 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 H3BUI4 141 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 H7C417 338 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 ARPC5O15511 151 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 CTAG2O75638 210 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 RBBP9O75884 186 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 SMIM6P0DI80 62 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 COX5BP10606 129 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 HLA-GP17693 338 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 RAD52P43351 418 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 MEOX2P50222 304 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 KRTAP27-1Q3LI81 207 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 TSPO2Q5TGU0 170 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 SFRP4Q6FHJ7 346 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-229ENST00000557348 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.06□□□□□ -0.64
SHMT2-229ENST00000557348 OR2W3Q7Z3T1 314 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 LYPD6Q86Y78 171 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 ZADH2Q8N4Q0 377 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 DMBX1Q8NFW5 382 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 OR4D10Q8NGI6 311 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 ST8SIA2Q92186 375 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 ADAT3Q96EY9 351 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-229ENST00000557348 WDYHV1Q96HA8 205 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 C12orf57Q99622 126 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 OR2H1Q9GZK4 316 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 NKIRAS2Q9NYR9 191 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 TAS2R3Q9NYW6 316 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 MTFP1Q9UDX5 166 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 GPR160Q9UJ42 338 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 RAB22AQ9UL26 194 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 PLEKHA6Q9Y2H5 1048 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 CEP250Q9BV73 2442 aa11.06□□□□□ -0.64
SHMT2-229ENST00000557348 TMEM272A0A1B0GTI8 110 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 A0A1B0GVC2 190 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 KANTRA0A1W2PQU2 76 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 TMEM82A0PJX8 343 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 DCDC2BA2VCK2 349 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 OR14I1A6ND48 311 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 A6NIN4 97 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 SLC22A20A6NK97 555 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 LDLRAD4O15165 306 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 B4GALT1P15291 398 aa11.05□□□□□ -0.64
SHMT2-229ENST00000557348 ZNF32P17041 273 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms