RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 LGALS14Q8TCE9 139 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 DEDD2Q8WXF8 326 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 CREB3L1Q96BA8 519 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 C10orf35Q96D05 121 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 HAVCR1Q96D42 359 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SCMH1Q96GD3 660 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GFI1Q99684 422 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 UQCC2Q9BRT2 126 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ZNF416Q9BWM5 594 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 LINC00470Q9BZP3 86 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ACTR6Q9GZN1 396 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 SLC25A18Q9H1K4 315 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 RNF121Q9H920 327 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 PLEKHA1Q9HB21 404 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 CRLF2Q9HC73 371 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 GPR35Q9HC97 309 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 NEK6Q9HC98 313 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TMEM38BQ9NVV0 291 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 RHBDL2Q9NX52 303 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TAS2R8Q9NYW2 309 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 COPZ2Q9P299 210 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ZNF391Q9UJN7 358 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 TUBD1Q9UJT1 453 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 FBXL3Q9UKT7 428 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 RAB22AQ9UL26 194 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 NOSIPQ9Y314 301 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 GOLGA4Q13439 2230 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 SCN3AQ9NY46 2000 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 MYO18BQ8IUG5 2567 aa3.88□□□□□ -1.79
SRP54-212ENST00000556992 ANKRD17O75179 2603 aaKnown RBP3.88□□□□□ -1.79
SRP54-212ENST00000556992 FANCMQ8IYD8 2048 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 A0A087WV48 116 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 TRGV5A0A0B4J1U4 118 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 A0A0B4J203 849 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 TRAV17A0A0B4J275 112 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 A0A1B0GVC2 190 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 LOC390937A0A1W2PQ73 354 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 MEIOCA2RUB1 952 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 OR6C6A6NF89 314 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 HMX3A6NHT5 357 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 A6NIN4 97 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF785A8K8V0 405 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 F5H5K5 113 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 H0YIZ8 118 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RPL36A-HNRNPH2H7BZ11 118 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SGCEO43556 437 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RBBP9O75884 186 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 JTBO76095 146 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 DHFRP00374 187 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 UBBP0CG47 229 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 TRAPPC2P0DI81 140 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 TRAPPC2BP0DI82 140 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF24P17028 368 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CCL1P22362 96 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SLC6A1P30531 599 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PRSS3P35030 304 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ARR3P36575 388 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CX3CR1P49238 355 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PRKXP51817 358 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF134P52741 427 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RAG2P55895 527 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CLDN12P56749 244 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF121P58317 390 aaPredicted RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 LINC00205P59089 165 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SSBP1Q04837 148 aaKnown RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 ENDOGQ14249 297 aaKnown RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 GPR176Q14439 515 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RAB35Q15286 201 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SF3B4Q15427 424 aaKnown RBP eCLIP3.87□□□□□ -1.791e-11■■□□□ 12.8
SRP54-212ENST00000556992 C3orf36Q3SXR2 165 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SLC36A2Q495M3 483 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 CCDC92Q53HC0 331 aaPredicted RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 PHYHD1Q5SRE7 291 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 RSBN1Q5VWQ0 802 aaPredicted RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 RAB12Q6IQ22 244 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 FAM166AQ6J272 317 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 IGFL2Q6UWQ7 119 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF813Q6ZN06 617 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 FAM57BQ71RH2 274 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 LINGO2Q7L985 606 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 KRT74Q7RTS7 529 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ABHD12BQ7Z5M8 362 aaPredicted RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 AKAP14Q86UN6 197 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 COMMD2Q86X83 199 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SIAH3Q8IW03 269 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZNF100Q8IYN0 542 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 UBE2J2Q8N2K1 259 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 LRRC18Q8N456 261 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 ZADH2Q8N4Q0 377 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 JAGN1Q8N5M9 183 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PNLDC1Q8NA58 520 aaKnown RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 DRAXINQ8NBI3 349 aaPredicted RBP3.87□□□□□ -1.79
SRP54-212ENST00000556992 DNAAF1Q8NEP3 725 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 OR51D1Q8NGF3 324 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 OR1F12Q8NHA8 337 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SMIM4Q8WVI0 70 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 PP6455Q8WZ26 134 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 YIPF5Q969M3 257 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 SLC25A28Q96A46 364 aa3.87□□□□□ -1.79
SRP54-212ENST00000556992 NABP1Q96AH0 204 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms