RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TSEN54Q7Z6J9 526 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 PATL1Q86TB9 770 aaKnown RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 KRT73Q86Y46 540 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 Q8N1X5 172 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 CYB561A3Q8NBI2 242 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TMEM185AQ8NFB2 350 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 GJC3Q8NFK1 279 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 OR1N2Q8NGR9 330 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ANGPTL6Q8NI99 470 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 UBLCP1Q8WVY7 318 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 SEH1LQ96EE3 360 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 MPP4Q96JB8 637 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 OR4C12Q96R67 309 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 FMO2Q99518 471 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 COQ7Q99807 217 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 NABP2Q9BQ15 211 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TMED9Q9BVK6 235 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 FUT8Q9BYC5 575 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 HDHD2Q9H0R4 259 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 TSPYL1Q9H0U9 437 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 C1orf21Q9H246 121 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 SNTG1Q9NSN8 517 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 ANGPT4Q9Y264 503 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 V9GYY5 206 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-245ENST00000556958 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
ATXN3-245ENST00000556958 PRSS29PA6NIE9 313 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 SMIM23A6NLE4 172 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 OR2AT4A6NND4 320 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ANKRD30BLA7E2S9 258 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CDIPTO14735 213 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 RER1O15258 196 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CDK2AP2O75956 126 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 BRI3O95415 125 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 RBP4P02753 201 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 FAM106CPP0CH98 169 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CD24P25063 80 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 HTR1DP28221 377 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 GNALP38405 381 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 DDOSTP39656 456 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 GPR12P47775 334 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 GMFBP60983 142 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZNF616Q08AN1 781 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 GPR50Q13585 617 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 TIGD6Q17RP2 521 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CCDC153Q494R4 210 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CCDC92Q53HC0 331 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-245ENST00000556958 SPANXN4Q5MJ08 99 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZBTB49Q6ZSB9 765 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 SLC35E3Q7Z769 313 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 C11orf53Q8IXP5 236 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZDHHC23Q8IYP9 409 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 PGAM4Q8N0Y7 254 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 STPG2Q8N412 459 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CCDC63Q8NA47 563 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZNRF1Q8ND25 227 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 OR1M1Q8NGA1 313 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 OR10Z1Q8NGY1 313 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 OR2T27Q8NH04 317 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 DCUN1D4Q92564 292 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZBTB9Q96C00 473 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 FAM110AQ9BQ89 295 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 PPP1R3EQ9H7J1 279 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ELL3Q9HB65 397 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-245ENST00000556958 RETNQ9HD89 108 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 C19orf12Q9NSK7 152 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 ZDHHC18Q9NUE0 388 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 NINJ2Q9NZG7 142 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 DPM3Q9P2X0 92 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 POLR1DQ9Y2S0 133 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 MOB4Q9Y3A3 225 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 CEPT1Q9Y6K0 416 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 HSPE1-MOB4S4R3N1 261 aa4.44□□□□□ -1.7
ATXN3-245ENST00000556958 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 A0A087WUV0 522 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-245ENST00000556958 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 C17orf98A8MV24 154 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 E9PBE3 544 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 F5H5K5 113 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 AP4M1O00189 453 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 KPNA4O00629 521 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-245ENST00000556958 RFXANKO14593 260 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 AHCYL1O43865 530 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 SERPINB7O75635 380 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 ANP32DO95626 131 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 C1QCP02747 245 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 CLEC2LP0C7M8 214 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 OR8U9P0C7N5 309 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 CTLA4P16410 223 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 TPTEP56180 551 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 TOP3AQ13472 1001 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-245ENST00000556958 VMACQ2NL98 169 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 LDLRAD2Q5SZI1 272 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 TMPRSS11FQ6ZWK6 438 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 GTSCR1Q86UQ5 136 aa4.43□□□□□ -1.7
ATXN3-245ENST00000556958 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms