RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 GPM6AP51674 278 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 OR12D2P58182 307 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 GNG3P63215 75 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 ADARB1P78563 741 aaKnown RBP19.09■□□□□ 0.65
TDP1-216ENST00000556867 GALEQ14376 348 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 CEP78Q5JTW2 689 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 TEX36Q5VZQ5 186 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 SFRP4Q6FHJ7 346 aaPredicted RBP19.09■□□□□ 0.65
TDP1-216ENST00000556867 FDX2Q6P4F2 183 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 LYPD2Q6UXB3 125 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 KCTD8Q6ZWB6 473 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 DHRSXQ8N5I4 330 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 CCDC54Q8NEL0 328 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 OR5A2Q8NGI9 324 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 OR10Z1Q8NGY1 313 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 MYCBPQ99417 103 aaPredicted RBP19.09■□□□□ 0.65
TDP1-216ENST00000556867 MYRFQ9Y2G1 1151 aa19.09■□□□□ 0.65
TDP1-216ENST00000556867 A0A1B0GVI7 797 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 ERICH4A6NGS2 130 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 SRRM5B3KS81 715 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 TNFRSF13BO14836 293 aaPredicted RBP19.08■□□□□ 0.64
TDP1-216ENST00000556867 PHF1O43189 567 aaPredicted RBP19.08■□□□□ 0.64
TDP1-216ENST00000556867 NDUFA2O43678 99 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 NRASP01111 189 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 UBCP0CG48 685 aaKnown RBP19.08■□□□□ 0.64
TDP1-216ENST00000556867 SRP14P37108 136 aaKnown RBP19.08■□□□□ 0.64
TDP1-216ENST00000556867 KIR3DL2P43630 455 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 PITPNBP48739 271 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 GNB2P62879 340 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 ODF4Q2M2E3 257 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 CLVS2Q5SYC1 327 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 PLCXD3Q63HM9 321 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 MOB3CQ70IA8 216 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 EGFL6Q8IUX8 553 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 SCCPDHQ8NBX0 429 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 SETD9Q8NE22 299 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 OR52I1Q8NGK6 324 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 OR2G2Q8NGZ5 317 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 RPL3LQ92901 407 aaKnown RBP19.08■□□□□ 0.64
TDP1-216ENST00000556867 ALG8Q9BVK2 526 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 OR5V1Q9UGF6 321 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 CUBNO60494 3623 aa19.08■□□□□ 0.64
TDP1-216ENST00000556867 TRAPPC2LH3BP13 241 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.07■□□□□ 0.64
TDP1-216ENST00000556867 SYT7O43581 403 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 ZNF12P17014 697 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 IL18R1Q13478 541 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 SMN1Q16637 294 aaKnown RBP19.07■□□□□ 0.64
TDP1-216ENST00000556867 KLHL22Q53GT1 634 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 C1orf229Q6ZS94 237 aaPredicted RBP19.07■□□□□ 0.64
TDP1-216ENST00000556867 FAM90A1Q86YD7 464 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 SYS1Q8N2H4 156 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 TEX29Q8N6K0 151 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 PELI1Q96FA3 418 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 C4orf36Q96KX1 117 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 ZNF649Q9BS31 505 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 ADI1Q9BV57 179 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 OR51I2Q9H344 312 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 MMP26Q9NRE1 261 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 ERVK13-1Q9NX77 482 aa19.07■□□□□ 0.64
TDP1-216ENST00000556867 LOC107986453A0A1B0GWG9 222 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 ZNF732B4DXR9 585 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 H0YAE9 185 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 J3QLW9 94 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 AVPP01185 164 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 MUC1P15941 1255 aaPredicted RBP19.06■□□□□ 0.64
TDP1-216ENST00000556867 ZNF19P17023 458 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 ZNF841Q6ZN19 808 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 LHFPL3Q86UP9 236 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 CNIH3Q8TBE1 160 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 JAM3Q9BX67 310 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 VCXQ9H320 206 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 FGF20Q9NP95 211 aaPredicted RBP19.06■□□□□ 0.64
TDP1-216ENST00000556867 CTSZQ9UBR2 303 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 CLN8Q9UBY8 286 aa19.06■□□□□ 0.64
TDP1-216ENST00000556867 NKX1-2Q9UD57 310 aaPredicted RBP19.06■□□□□ 0.64
TDP1-216ENST00000556867 HTR1AP08908 422 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 CAPGP40121 348 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 CCR9P51686 369 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 NANOS3P60323 173 aaKnown RBP19.05■□□□□ 0.64
TDP1-216ENST00000556867 PAX2Q02962 417 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 SLC34A1Q06495 639 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 MICBQ29980 383 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 DMRTC1Q5HYR2 192 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 WDR25Q64LD2 544 aaPredicted RBP19.05■□□□□ 0.64
TDP1-216ENST00000556867 C12orf43Q96C57 262 aaKnown RBP19.05■□□□□ 0.64
TDP1-216ENST00000556867 C7orf69Q9H7B7 122 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 PLEKHA1Q9HB21 404 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 GPR173Q9NS66 373 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 FRRS1LQ9P0K9 344 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 OPN4Q9UHM6 478 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 INSIG2Q9Y5U4 225 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 HSPE1-MOB4S4R3N1 261 aa19.05■□□□□ 0.64
TDP1-216ENST00000556867 LOC105371242A0A075B767 164 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 IGHV3OR15-7A0A075B7D8 119 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 ADAM20O43506 726 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 GYPAP02724 150 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 ISG15P05161 165 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 NPY4RP50391 375 aa19.04■□□□□ 0.64
TDP1-216ENST00000556867 TMEM244Q5VVB8 128 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms