RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FKBP14Q9NWM8 211 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 C14orf119Q9NWQ9 140 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 RNF7Q9UBF6 113 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 PSORS1C1Q9UIG5 152 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 DIMT1Q9UNQ2 313 aaKnown RBP8.09□□□□□ -1.11
SRP54-210ENST00000556380 PIGLQ9Y2B2 252 aa8.09□□□□□ -1.11
SRP54-210ENST00000556380 WNK2Q9Y3S1 2297 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 IRGMA1A4Y4 181 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 LRRC30A6NM36 301 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 A8MV72 311 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 B4DSR2 109 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 F5H0A9 414 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 LMX1BO60663 402 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 MTRF1O75570 445 aaKnown RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 ZNF205O95201 554 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 GRPP07492 148 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 WNT2P09544 360 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 PIPP12273 146 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 FAHP16930 419 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 ZNF16P17020 682 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 GNALP38405 381 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 MDH2P40926 338 aaKnown RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 ZNF154Q13106 437 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 ALKBH1Q13686 389 aaKnown RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 WDR82Q6UXN9 313 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 FAM220AQ7Z4H9 259 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 ZDHHC23Q8IYP9 409 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 GCSAMQ8N6F7 178 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 CCDC54Q8NEL0 328 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 OR5A2Q8NGI9 324 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 OR8S1Q8NH09 359 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 MRPL48Q96GC5 212 aaKnown RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 MICU1Q9BPX6 476 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 TMEM246Q9BRR3 403 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 SSBP4Q9BWG4 385 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 OR51I2Q9H344 312 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 METTL17Q9H7H0 456 aaPredicted RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 PATZ1Q9HBE1 687 aaKnown RBP8.08□□□□□ -1.12
SRP54-210ENST00000556380 YAE1D1Q9NRH1 226 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 C1orf123Q9NWV4 160 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 CLEC2DQ9UHP7 191 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 ENPP5Q9UJA9 477 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 GTF2A1LQ9UNN4 478 aa8.08□□□□□ -1.12
SRP54-210ENST00000556380 PPIAL4EA0A075B759 164 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 A0A1B0GVI7 797 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 EFCAB10A6NFE3 127 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 A6NIN4 97 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 TMEM210A6NLX4 147 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ANXA2P2A6NMY6 339 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CEACAM18A8MTB9 384 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 INAFM1C9JVW0 142 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 PPIAL4DF5H284 164 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CDIPTO14735 213 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 SYT7O43581 403 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 XPNPEP2O43895 674 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 NRASP01111 189 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 TGFAP01135 160 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 HTR1AP08908 422 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 UBCP0CG48 685 aaKnown RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 PPIAL4FP0DN26 164 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 EGR1P18146 543 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 MYF6P23409 242 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CPT2P23786 658 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ZFP36P26651 326 aaKnown RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 TGM4P49221 684 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 DVL1P1P54792 670 aaPredicted RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 CSNK2BP67870 215 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ST3GAL4Q11206 333 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ODF4Q2M2E3 257 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ZNF404Q494X3 552 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 DMRTC1Q5HYR2 192 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CEP78Q5JTW2 689 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CLVS2Q5SYC1 327 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 C6orf141Q5SZD1 244 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 TMEM244Q5VVB8 128 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 MOB3CQ70IA8 216 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 ZNF771Q7L3S4 317 aaPredicted RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 COMMD2Q86X83 199 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 C1orf87Q8N0U7 546 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 SPICQ8N5J4 248 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 OR11L1Q8NGX0 322 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 OR10AC1Q8NH08 325 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 RPS4Y2Q8TD47 263 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 HAVCR2Q8TDQ0 301 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 WFDC12Q8WWY7 111 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 RPL3LQ92901 407 aaKnown RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 TMEM80Q96HE8 168 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 RNF170Q96K19 258 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 GAL3ST1Q99999 423 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 RTL8AQ9BWD3 113 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 CNOT2Q9NZN8 540 aaKnown RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 CAB39Q9Y376 341 aaPredicted RBP8.07□□□□□ -1.12
SRP54-210ENST00000556380 PPIAL4AQ9Y536 164 aa8.07□□□□□ -1.12
SRP54-210ENST00000556380 LOC107986453A0A1B0GWG9 222 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 PQLC2LA1A4F0 135 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 ISPDA4D126 451 aa8.06□□□□□ -1.12
SRP54-210ENST00000556380 OR5B21A6NL26 309 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms