RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 BTG2P78543 158 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CYCSP99999 105 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FLI1Q01543 452 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OC90Q02509 493 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 MFGE8Q08431 387 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 AIMP2Q13155 320 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SNTB1Q13884 538 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FZD2Q14332 565 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 MELKQ14680 651 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ATXN7L3Q14CW9 347 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ARL6IP1Q15041 203 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 EBPQ15125 230 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ACKR1Q16570 336 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 LRRC37A5PQ49AS3 106 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF542PQ5EBM4 170 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 GLYATL3Q5SZD4 288 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PXDC1Q5TGL8 231 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 NKAIN2Q5VXU1 208 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PMS2CLQ68D20 193 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 AWAT2Q6E213 333 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ELP2Q6IA86 826 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 RGS7BPQ6MZT1 257 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FAHD2BQ6P2I3 314 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 DEGS2Q6QHC5 323 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CFAP77Q6ZQR2 320 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 DNM1P46Q6ZS02 220 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ACOT7LQ6ZUV0 252 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 LYG2Q86SG7 212 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FJX1Q86VR8 437 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CATSPERDQ86XM0 798 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF101Q8IZC7 436 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SLC22A18ASQ8N1D0 253 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PRSS35Q8N3Z0 413 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 STPG2Q8N412 459 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 KCNRGQ8N5I3 272 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 EIF4E3Q8N5X7 224 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 PNLDC1Q8NA58 520 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CLEC1AQ8NC01 280 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ACBD4Q8NC06 268 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OR51A4Q8NGJ6 313 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OR5M9Q8NGP3 310 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OR2AJ1Q8NGZ0 328 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OR10AC1Q8NH08 325 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 OR1S1Q8NH92 325 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF519Q8TB69 540 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNRF4Q8WWF5 429 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ST8SIA1Q92185 356 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 DCUN1D4Q92564 292 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 TAAR8Q969N4 342 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 RPL36ALQ969Q0 106 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CPNE2Q96FN4 548 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FAHD2AQ96GK7 314 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SLC6A7Q99884 636 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 VRK1Q99986 396 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 VKORC1Q9BQB6 163 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 NUDT16L1Q9BRJ7 211 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 UQCC2Q9BRT2 126 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 URM1Q9BTM9 101 aaKnown RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 LRRC61Q9BV99 259 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 NUDT9Q9BW91 350 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF416Q9BWM5 594 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 NKX6-2Q9C056 277 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-241ENST00000556374 WWTR1Q9GZV5 400 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 DNTTIP1Q9H147 329 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF304Q9HCX3 659 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SDHAF3Q9NRP4 125 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 SERINC1Q9NRX5 453 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 CENPMQ9NSP4 180 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 FBN2P35556 2912 aa3.88□□□□□ -1.79
ATXN3-241ENST00000556374 RELNP78509 3460 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 NINQ8N4C6 2090 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 LOC100509620A0A075B734 347 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 IGLV1-36A0A0B4J1U3 117 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 A0A1B0GTH9 108 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM269A0A1B0GVZ9 245 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 A0A1W2PPC4 97 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SLC22A23A1A5C7 686 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RAB19A4D1S5 217 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TMEM235A6NFC5 223 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ANKUB1A6NFN9 424 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 OR5H14A6NHG9 310 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 NPIPB13A6NJU9 1138 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 VSTM2BA6NLU5 285 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 VWC2LB2RUY7 222 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ALG1L2C9J202 215 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 NPIPB4C9JG80 1138 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF878C9JN71 531 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 P2RY10O00398 339 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TO15178 435 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 SYT7O43581 403 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 TSPAN2O60636 221 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 RAD1O60671 282 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 ZNF217O75362 1048 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CD8AP01732 235 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CD74P04233 296 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 IGHV4-34P06331 123 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 FCER2P06734 321 aa3.87□□□□□ -1.79
ATXN3-241ENST00000556374 HOXD4P09016 255 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 PVALBP20472 110 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-241ENST00000556374 CNR1P21554 472 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms