RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 PCGF3Q3KNV8 242 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 FAM209AQ5JX71 171 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 SP5Q6BEB4 398 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 MKXQ8IYA7 352 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 MUC15Q8N387 334 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 ZSCAN4Q8NAM6 433 aaPredicted RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 OR52N4Q8NGI2 321 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 MCFD2Q8NI22 146 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 UBASH3BQ8TF42 649 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 OR5P3Q8WZ94 311 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 FBXW5Q969U6 566 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 ORAI1Q96D31 301 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 CEP19Q96LK0 163 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 CMTM3Q96MX0 182 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 MRPL37Q9BZE1 423 aaKnown RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 EGLN1Q9GZT9 426 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 DYNLRB1Q9NP97 96 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 ING4Q9UNL4 249 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 POLDIP2Q9Y2S7 368 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 PEX16Q9Y5Y5 336 aa7.88□□□□□ -1.15
ACTN1-218ENST00000556343 HEATR1Q9H583 2144 aaKnown RBP7.88□□□□□ -1.15
ACTN1-218ENST00000556343 IGKV1-9A0A0C4DH69 117 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 LRP5LA4QPB2 252 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CLEC18AA5D8T8 446 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 M0R233 179 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 HS3ST1O14792 307 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 RGS5O15539 181 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 NCR1O76036 304 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 BPNT1O95861 308 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 TMEM225BP0DP42 221 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CD37P11049 281 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ARSBP15848 533 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 TNFRSF1AP19438 455 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ANOS1P23352 680 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CFPP27918 469 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 PTGFRP43088 359 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ZNF81P51508 661 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 BMXP51813 675 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 PRSS12P56730 875 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 OR10A3P58181 314 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 C1orf100Q5SVJ3 147 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 HES5Q5TA89 166 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 AWAT2Q6E213 333 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CLEC18BQ6UXF7 455 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 LINC00299Q6ZSB3 139 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 LRP11Q86VZ4 500 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ANGPTL5Q86XS5 388 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CELF2-AS1Q8N7Q2 184 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CLEC18CQ8NCF0 446 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 OR2Z1Q8NG97 314 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 OR51A2Q8NGJ7 313 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 TRMT10AQ8TBZ6 339 aaKnown RBP7.87□□□□□ -1.15
ACTN1-218ENST00000556343 NPRL2Q8WTW4 380 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 TNFAIP8L1Q8WVP5 186 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ERGIC1Q969X5 290 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 PHF21AQ96BD5 680 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 PKIBQ9C010 78 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 C6orf62Q9GZU0 229 aaPredicted RBP7.87□□□□□ -1.15
ACTN1-218ENST00000556343 METTL9Q9H1A3 318 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 CNTD2Q9H8S5 307 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ELL3Q9HB65 397 aaPredicted RBP7.87□□□□□ -1.15
ACTN1-218ENST00000556343 RHOFQ9HBH0 211 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 DECR2Q9NUI1 292 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 IL19Q9UHD0 177 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 MRPS28Q9Y2Q9 187 aaKnown RBP7.87□□□□□ -1.15
ACTN1-218ENST00000556343 ETV7Q9Y603 341 aa7.87□□□□□ -1.15
ACTN1-218ENST00000556343 LOC100289279A0A1B0GTE1 492 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SHISA3A0PJX4 238 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 PQLC2LA1A4F0 135 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SMIM30A4D0T7 59 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 TRAPPC2LH3BP13 241 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 H3BUI4 141 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 TPD52L2O43399 206 aaKnown RBP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SPRY3O43610 288 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 CLPXO76031 633 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 KDM4BO94953 1096 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 CSTBP04080 98 aaKnown RBP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ADRA2CP18825 462 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 LOXP28300 417 aaPredicted RBP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 CD200P41217 278 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 HAAOP46952 286 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 MMP15P51511 669 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 GPM6AP51674 278 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 CAV3P56539 151 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 TNFAIP6P98066 277 aaPredicted RBP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SRSF1Q07955 248 aaKnown RBP eCLIP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 PDZK1IP1Q13113 114 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 RSU1Q15404 277 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ALKBH6Q3KRA9 238 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ASPHD2Q6ICH7 369 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 GLIPR1L1Q6UWM5 242 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SAXO1Q8IYX7 474 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ACBD4Q8NC06 268 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 PXT1Q8NFP0 134 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 PTX4Q96A99 478 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ITPKCQ96DU7 683 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 ELMOD3Q96FG2 381 aa7.86□□□□□ -1.15
ACTN1-218ENST00000556343 SLIRPQ9GZT3 109 aaKnown RBP7.86□□□□□ -1.15
ACTN1-218ENST00000556343 RAB1BQ9H0U4 201 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms