RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZDHHC23Q8IYP9 409 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 FTMTQ8N4E7 242 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SYNPRQ8TBG9 265 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 LGALS14Q8TCE9 139 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SLC25A28Q96A46 364 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 BORCS8Q96FH0 119 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 METTL17Q9H7H0 456 aaPredicted RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 MSL2Q9HCI7 577 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 OR5V1Q9UGF6 321 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 CMAHPQ9Y471 501 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 A3GALT2U3KPV4 340 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SHISA9B4DS77 424 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ALDOBP05062 364 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ZNF250P15622 560 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 KITLGP21583 273 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 TUBG1P23258 451 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 TNFSF8P32971 234 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 S100A5P33763 92 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 KIR2DL3P43628 341 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 EIF2B2P49770 351 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 GPM6AP51674 278 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 CNN3Q15417 329 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 MOGQ16653 247 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 C2orf76Q3KRA6 126 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 C1orf100Q5SVJ3 147 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 OR10K2Q6IF99 312 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 MZT2AQ6P582 158 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 C16orf87Q6PH81 154 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 Q6ZR03 302 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 KRT74Q7RTS7 529 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 C1QL2Q7Z5L3 287 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SAMD12Q8N8I0 201 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 NUP37Q8NFH4 326 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 OR8G5Q8NG78 346 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 GTF3AQ92664 365 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 SPSB1Q96BD6 273 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 FAM3DQ96BQ1 224 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 FOXRED1Q96CU9 486 aaPredicted RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 KCTD12Q96CX2 325 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 PIK3IP1Q96FE7 263 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SORCS2Q96PQ0 1159 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 MRPL37Q9BZE1 423 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 TUBG2Q9NRH3 451 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 MRPL15Q9P015 296 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 ABRACLQ9P1F3 81 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 SLC7A11Q9UPY5 501 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 PEX16Q9Y5Y5 336 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 HCFC1P51610 2035 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ICE1Q9Y2F5 2266 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 ANKHD1Q8IWZ3 2542 aaKnown RBP8.72□□□□□ -1.01
SRP54-208ENST00000555557 TENM4Q6N022 2769 aa8.72□□□□□ -1.01
SRP54-208ENST00000555557 DEFB108AA8MXU0 73 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 ZNF732B4DXR9 585 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 SPRY1O43609 319 aaPredicted RBP8.71□□□□□ -1.02
SRP54-208ENST00000555557 CD3EP07766 207 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 BMP4P12644 408 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 ARSBP15848 533 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 SELEP16581 610 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 PRKACBP22694 351 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 POU3F4P49335 361 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 RBP2P50120 134 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 FUT6P51993 359 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 EFNB2P52799 333 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 NDUFA5Q16718 116 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 CEACAM21Q3KPI0 293 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 BEX5Q5H9J7 111 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 AWAT2Q6E213 333 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 METAP1DQ6UB28 335 aaPredicted RBP8.71□□□□□ -1.02
SRP54-208ENST00000555557 GLIPR1L1Q6UWM5 242 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 C1orf174Q8IYL3 243 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 OR10AD1Q8NGE0 317 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 OR6M1Q8NGM8 313 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 ACOT12Q8WYK0 555 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 OR5P3Q8WZ94 311 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 RNF170Q96K19 258 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 CEP19Q96LK0 163 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 HIST1H2AAQ96QV6 131 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 GAL3ST1Q99999 423 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 UQCC2Q9BRT2 126 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 TMEM100Q9NV29 134 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 SPATA2Q9UM82 520 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 MPC1Q9Y5U8 109 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 PLCE1Q9P212 2302 aa8.71□□□□□ -1.02
SRP54-208ENST00000555557 WIPF3A6NGB9 483 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 E7EQL1 145 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 MLNRO43193 412 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ANGPTL7O43827 346 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 IGHV3-13P01766 116 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 EIF4EP06730 217 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 OR4A8P0C604 315 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 ELK1P19419 428 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 PTGFRP43088 359 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 KLF3P57682 345 aaPredicted RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 RPS23P62266 143 aaKnown RBP8.7□□□□□ -1.02
SRP54-208ENST00000555557 ADIPOQQ15848 244 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 RGS21Q2M5E4 152 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 CALHM1Q8IU99 346 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 BATF2Q8N1L9 274 aa8.7□□□□□ -1.02
SRP54-208ENST00000555557 OR8S1Q8NH09 359 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms