RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR52E5Q8NH55 327 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ENKURQ8TC29 256 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ITLN2Q8WWU7 325 aaPredicted RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 BTN2A3PQ96KV6 586 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ZNF75AQ96N20 296 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ZNF649Q9BS31 505 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CALN1Q9BXU9 219 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TBL1XR1Q9BZK7 514 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 TOLLIPQ9H0E2 274 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 NT5C3AQ9H0P0 336 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 PORCNQ9H237 461 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 MCUBQ9NWR8 336 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 LYARQ9NX58 379 aaKnown RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 ADA2Q9NZK5 511 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CLN8Q9UBY8 286 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 HMGXB4Q9UGU5 601 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 CES1P1Q9UKY3 287 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ACOT9Q9Y305 439 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 PPIL1Q9Y3C6 166 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 NCKAP5O14513 1909 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ADAMTSL3P82987 1691 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 ELP1O95163 1332 aa0.61□□□□□ -2.31
SRP54-207ENST00000555535 BAZ1BQ9UIG0 1483 aaKnown RBP0.61□□□□□ -2.31
SRP54-207ENST00000555535 IZUMO1RA6ND01 250 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 C15orf65H3BRN8 121 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 RGS5O15539 181 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 SYNGR2O43760 224 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 MPDU1O75352 247 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 CTAG2O75638 210 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 AQP8O94778 261 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 KCNK2O95069 426 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 SNX4O95219 450 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 LCA5LO95447 670 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 CXorf1O96002 111 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 IGHV1-46P01743 117 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 IGHG2P01859 326 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 IGKV1-16P04430 117 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 OR5AC1P0C628 307 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 UBCP0CG48 685 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 IFI30P13284 250 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 RAB5AP20339 215 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 GSTM3P21266 225 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 STOMP27105 288 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 S100A2P29034 98 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 GNRHRP30968 328 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 PCK1P35558 622 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 FUSP35637 526 aaKnown RBP eCLIP0.6□□□□□ -2.31
SRP54-207ENST00000555535 OR1G1P47890 313 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 TUFMP49411 452 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 RPS15P62841 145 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 GRB2P62993 217 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 PAFAH1B2P68402 229 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 ATP5G2Q06055 141 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 INCA1Q0VD86 236 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 MERTKQ12866 999 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 CUL2Q13617 745 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 OR1Q1Q15612 314 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 MFSD14CQ5VZR4 134 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 KCTD16Q68DU8 428 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 THOC7Q6I9Y2 204 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 MORN3Q6PF18 240 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 METAP1DQ6UB28 335 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 TMEM144Q7Z5S9 345 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 GABRG1Q8N1C3 465 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 KIF2BQ8N4N8 673 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 JAGN1Q8N5M9 183 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 EIF4E3Q8N5X7 224 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 CYB561A3Q8NBI2 242 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 LY6G5BQ8NDX9 201 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 OR8K3Q8NH51 312 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 ZNF606Q8WXB4 792 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 NRGNQ92686 78 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 NAPGQ99747 312 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 GABRG3Q99928 467 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 BPIFA3Q9BQP9 254 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 TMEM175Q9BSA9 504 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 MTG1Q9BT17 334 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 EMC6Q9BV81 110 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 SFXN3Q9BWM7 321 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 ABCG5Q9H222 651 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 GEMIN7Q9H840 131 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 SND1-IT1Q9HBX3 110 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 TMEM165Q9HC07 324 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 PXMP2Q9NR77 195 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 INIPQ9NRY2 104 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 NLE1Q9NVX2 485 aaPredicted RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 CLN6Q9NWW5 311 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 MYEF2Q9P2K5 600 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 STX18Q9P2W9 335 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 ICOSQ9Y6W8 199 aa0.6□□□□□ -2.31
SRP54-207ENST00000555535 NYNRINQ9P2P1 1898 aaKnown RBP0.6□□□□□ -2.31
SRP54-207ENST00000555535 MED13Q9UHV7 2174 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 SYNJ2BP-COX16A0A087WUM0 186 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 TRAV8-6A0A0B4J262 113 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 CTAGE15A4D2H0 777 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 GOLGA8JA6NMD2 632 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 MYL12BO14950 172 aa0.59□□□□□ -2.31
SRP54-207ENST00000555535 ZNF73O43830 326 aaPredicted RBP0.59□□□□□ -2.31
SRP54-207ENST00000555535 ENTPD6O75354 484 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms