RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 SERPINA2P20848 420 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 KIR2DL1P43626 348 aaPredicted RBP13.86□□□□□ -0.19
SYNE3-203ENST00000554873 GABRA4P48169 554 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 RAB38P57729 211 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 PRPS1P60891 318 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SMAD4Q13485 552 aaKnown RBP13.86□□□□□ -0.19
SYNE3-203ENST00000554873 NFATC4Q14934 902 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 WDR38Q5JTN6 314 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 TAAR8Q969N4 342 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 C5orf34Q96MH7 638 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 CKLFQ9UBR5 152 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SUSD2Q9UGT4 822 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 DKKL1Q9UK85 242 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 FTCDNL1E5RQL4 147 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 TGFBR3LH3BV60 316 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 K7EQS6 105 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 C1QL1O75973 258 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 VEGFBP49765 207 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF429Q86V71 674 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SFTPA2Q8IWL1 248 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 DTWD2Q8NBA8 298 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 OR1P1Q8NH06 330 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 MRGPRX4Q96LA9 322 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 GPX7Q96SL4 187 aaPredicted RBP13.86□□□□□ -0.19
SYNE3-203ENST00000554873 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 CGGBP1Q9UFW8 167 aaPredicted RBP13.86□□□□□ -0.19
SYNE3-203ENST00000554873 KNL1Q8NG31 2342 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 XIRP2A4UGR9 3374 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 RBFOX3A6NFN3 312 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 WIPF3A6NGB9 483 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SERINC4A6NH21 518 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 HSPB2A8KAH6 182 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF264O43296 627 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 HSPA12AO43301 675 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 OR4A8P0C604 315 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SUPT4H1P63272 117 aaKnown RBP13.86□□□□□ -0.19
SYNE3-203ENST00000554873 EGR3Q06889 387 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 HSPB2Q16082 182 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 IQCJQ1A5X6 159 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 YAF2Q8IY57 180 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 BMFQ96LC9 184 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 PRRX2Q99811 253 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 RAB22AQ9UL26 194 aa13.86□□□□□ -0.19
SYNE3-203ENST00000554873 SCAF4O95104 1147 aaKnown RBP13.85□□□□□ -0.19
SYNE3-203ENST00000554873 PGA3P0DJD8 388 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 GIMD1P0DJR0 217 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 KLK2P20151 261 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 SLC25A1P53007 311 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 PPP1CAP62136 330 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 TRA2AQ13595 282 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNE3-203ENST00000554873 HAGHQ16775 308 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 TMEM196Q5HYL7 178 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 TEX38Q6PEX7 206 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 RNF44Q7L0R7 432 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 NKD1Q969G9 470 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 OR51B6Q9H340 312 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 A0A1B0GV50 99 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 CEACAM18A8MTB9 384 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 ZNF217O75362 1048 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 DEDDO75618 318 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 RPS27P42677 84 aaKnown RBP13.85□□□□□ -0.19
SYNE3-203ENST00000554873 CTXN1P60606 82 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 RBX1P62877 108 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 SLC35E3Q7Z769 313 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 C10orf53Q8N6V4 93 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 LRRC75AQ8NAA5 344 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 CHST4Q8NCG5 386 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 NIPSNAP3BQ9BS92 247 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 GAL3ST2Q9H3Q3 398 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 PARD6AQ9NPB6 346 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 HRASLS2Q9NWW9 162 aa13.85□□□□□ -0.19
SYNE3-203ENST00000554873 LNP1A1A4G5 178 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 ITGB1BP1O14713 200 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 SRP19P09132 144 aaKnown RBP13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CT45A8P0DMV1 189 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CT45A9P0DMV2 189 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 GRK6P43250 576 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CT45A2Q5DJT8 189 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 C1orf194Q5T5A4 169 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 AADACL3Q5VUY0 350 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 APCDD1LQ8NCL9 501 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 OR4K15Q8NH41 348 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 C22orf15Q8WYQ4 148 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 ZPBPQ9BS86 351 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CDH20Q9HBT6 801 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 SEMA5BQ9P283 1151 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 VAX2Q9UIW0 290 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CYP8B1Q9UNU6 501 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 DHDHQ9UQ10 334 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CACNA1IQ9P0X4 2223 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 H7C1C5 153 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 PRKNO60260 465 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-203ENST00000554873 CHRM2P08172 466 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 P2RY1P47900 373 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 LCN6P62502 163 aa13.84□□□□□ -0.19
SYNE3-203ENST00000554873 COA6Q5JTJ3 125 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms