RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ZNF12P17014 697 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 KITLGP21583 273 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 HTR5AP47898 357 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 CCR9P51686 369 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 RIDAP52758 137 aaKnown RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 HCCSP53701 268 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 PCBD1P61457 104 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 NCS1P62166 190 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 RPS25P62851 125 aaKnown RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ZMYND11Q15326 602 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 SYT9Q86SS6 491 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 C1orf174Q8IYL3 243 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 SIGLECL1Q8N7X8 197 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 YIPF7Q8N8F6 280 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ST7LQ8TDW4 575 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 THEM6Q8WUY1 208 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 KCTD7Q96MP8 289 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF48Q96MX3 618 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 DUX5Q96PT3 197 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 JMJD8Q96S16 334 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 DCLRE1CQ96SD1 692 aaKnown RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 DIRC2Q96SL1 478 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 DCUN1D5Q9BTE7 237 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 CENPOQ9BU64 300 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ABHD6Q9BV23 337 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 MROQ9BYG7 248 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ELOVL3Q9HB03 270 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 PATZ1Q9HBE1 687 aaKnown RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 TBCCD1Q9NVR7 557 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 TXNL4BQ9NX01 149 aaKnown RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF69Q9UC07 566 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 CYB5R1Q9UHQ9 305 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 GNG8Q9UK08 70 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 IKZF2Q9UKS7 526 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 KLHDC2Q9Y2U9 406 aa8.88□□□□□ -0.99
SHMT2-215ENST00000554656 POLR3KQ9Y2Y1 108 aaPredicted RBP8.88□□□□□ -0.99
SHMT2-215ENST00000554656 TRRAPQ9Y4A5 3859 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 OR6C6A6NF89 314 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 DNAJC9-AS1A6NH13 148 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 A8MXK9 166 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 E9PI62 339 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 GABRPO00591 440 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 SGCEO43556 437 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 FOXH1O75593 365 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 GATBO75879 557 aaKnown RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 CLPXO76031 633 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 DBHP09172 617 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF182P17025 639 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 SOX6P35712 828 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 LSM3P62310 102 aaKnown RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 DBPQ10586 325 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 ALKBH1Q13686 389 aaKnown RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 EIF2B1Q14232 305 aaKnown RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 MEP1BQ16820 701 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 ZMAT1Q5H9K5 638 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 ARL9Q6T311 187 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 UNQ6126/PRO20091Q6UXV3 157 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 KRT77Q7Z794 578 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 LRRC28Q86X40 367 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 OR2Z1Q8NG97 314 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 NDNFQ8TB73 568 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 RNF133Q8WVZ7 376 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 CMBLQ96DG6 245 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 PGLYRP3Q96LB9 341 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 CDADC1Q9BWV3 514 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 NXF2Q9GZY0 626 aaKnown RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 MMP27Q9H306 513 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 ACOXLQ9NUZ1 547 aa8.87□□□□□ -0.99
SHMT2-215ENST00000554656 SOX21Q9Y651 276 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 SIRT4Q9Y6E7 314 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-215ENST00000554656 A0A075B6Q4 140 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TRBV2A0A0J9YWF9 115 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM212A6NML5 194 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 PRR32B1ATL7 298 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF878C9JN71 531 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 KCNAB3O43448 404 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM127O75204 238 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 GPANK1O95872 356 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HKR1P10072 659 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 CFL1P23528 166 aaKnown RBP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 SLC6A9P48067 706 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 MMP16P51512 607 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 BTG1P62324 171 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HIST1H3AP68431 136 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 FABP5Q01469 135 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 PAX2Q02962 417 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 SCRN3Q0VDG4 424 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 ZNF154Q13106 437 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HLXQ14774 488 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 TMEM155Q4W5P6 130 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 CCDC92Q53HC0 331 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-215ENST00000554656 YIF1BQ5BJH7 314 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HIST2H3PS2Q5TEC6 136 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 UNQ9370/PRO34162Q6UXP9 181 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 HIST2H3AQ71DI3 136 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 DOK3Q7L591 496 aa8.86□□□□□ -0.99
SHMT2-215ENST00000554656 DCXRQ7Z4W1 244 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms