RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SULT1C2O00338 296 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 IFNA4P05014 189 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 GFRA1P56159 465 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 MOB3CQ70IA8 216 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 AAED1Q7RTV5 226 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 OR6K3Q8NGY3 331 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM54Q969K7 222 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 C7orf50Q9BRJ6 194 aaKnown RBP10.25□□□□□ -0.77
SHMT2-212ENST00000554467 TTTY12Q9BZ98 90 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 SLC25A32Q9H2D1 315 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 NELFAQ9H3P2 528 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF703Q9H7S9 590 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-212ENST00000554467 RASL12Q9NYN1 266 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 PLEK2Q9NYT0 353 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF716A6NP11 495 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 TTLL8A6PVC2 850 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 PYCARD-AS1I3L0S3 204 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 CREBL2O60519 120 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-212ENST00000554467 PRAF2O60831 178 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 RBBP9O75884 186 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 VAMP5O95183 116 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 MOGAT2Q3SYC2 334 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 LRRC37A5PQ49AS3 106 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 GLT8D1Q68CQ7 371 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 ADGRG7Q96K78 797 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 MICU1Q9BPX6 476 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 FAM173AQ9BQD7 235 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 CNTD2Q9H8S5 307 aa10.25□□□□□ -0.77
SHMT2-212ENST00000554467 FOXD3Q9UJU5 478 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-212ENST00000554467 DISC1C4P0D8 188 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ISG15P05161 165 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF35P13682 527 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 AIMP2Q13155 320 aaKnown RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 GALNT16Q8N428 558 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ACBD4Q8NC06 268 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 KCNE4Q8WWG9 221 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 TSNAXQ99598 290 aaKnown RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 DEFB127Q9H1M4 99 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 LOC100289279A0A1B0GTE1 492 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 PMP22Q01453 160 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 TCF15Q12870 199 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM251Q8N6I4 163 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM185AQ8NFB2 350 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 AKR7LQ8NHP1 331 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 RAB40AQ8WXH6 277 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 FAM117AQ9C073 453 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM218A2RU14 115 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 GGT3PA6NGU5 568 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 GOSR2O14653 212 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 GLSO94925 669 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF20P17024 532 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 WT1P19544 449 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 NFYBP25208 207 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 NPBWR1P48145 328 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 SNTB1Q13884 538 aaKnown RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 RSPO1Q2MKA7 263 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-212ENST00000554467 SCGB2B2Q4G0G5 96 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF774Q6NX45 483 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 C20orf196Q8IYI0 205 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 OR51S1Q8NGJ8 323 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 OR5D18Q8NGL1 313 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 FGFBP3Q8TAT2 258 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 FNDC9Q8TBE3 224 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 PGAM5Q96HS1 289 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 LIPGQ9Y5X9 500 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 ETV7Q9Y603 341 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 NBEAQ8NFP9 2946 aa10.24□□□□□ -0.77
SHMT2-212ENST00000554467 GATCO43716 136 aaKnown RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 SMIM6P0DI80 62 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 MEOX1P50221 254 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ATXN7L3Q14CW9 347 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 FAM166AQ6J272 317 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 OR2AE1Q8NHA4 323 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 TLNRD1Q9H1K6 362 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 OR51M1Q9H341 326 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 SEBOXQ9HB31 216 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ABI3Q9P2A4 366 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 UBE2QL1A1L167 161 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 M0QYG6 137 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ACOT7O00154 380 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 RNF224P0DH78 156 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 RD3LP0DJH9 198 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 MNDAP41218 407 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 CCL11P51671 97 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 CEACAM16Q2WEN9 425 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 C10orf128Q5T292 105 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ANKRD16Q6P6B7 361 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 GPR137CQ8N3F9 429 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 OR4C16Q8NGL9 310 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 LYZL4Q96KX0 146 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF75AQ96N20 296 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 PAPOLGQ9BWT3 736 aaKnown RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 EXO5Q9H790 373 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 CALHM2Q9HA72 323 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 GPN1Q9HCN4 374 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 CTDSPLO15194 276 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 XRCC3O43542 346 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms