RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 RBM48Q5RL73 367 aaKnown RBP13.97□□□□□ -0.17
NEK9-204ENST00000554258 KCTD18Q6PI47 426 aaPredicted RBP13.97□□□□□ -0.17
NEK9-204ENST00000554258 ZNF322Q6U7Q0 402 aaPredicted RBP13.97□□□□□ -0.17
NEK9-204ENST00000554258 COLCA1Q6ZS62 124 aa13.97□□□□□ -0.17
NEK9-204ENST00000554258 SSX6Q7RTT6 188 aa13.97□□□□□ -0.17
NEK9-204ENST00000554258 ZNF679Q8IYX0 411 aa13.97□□□□□ -0.17
NEK9-204ENST00000554258 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
NEK9-204ENST00000554258 OR8B4Q96RC9 309 aa13.97□□□□□ -0.17
NEK9-204ENST00000554258 DIMT1Q9UNQ2 313 aaKnown RBP13.97□□□□□ -0.17
NEK9-204ENST00000554258 HERC2O95714 4834 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 FAM20BO75063 409 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 SULT1C4O75897 302 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 HTR5AP47898 357 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 GRB2P62993 217 aaKnown RBP13.96□□□□□ -0.17
NEK9-204ENST00000554258 ST3GAL4Q11206 333 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 GALEQ14376 348 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 TBC1D28Q2M2D7 210 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 CDONQ4KMG0 1287 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 RNLSQ5VYX0 342 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 LRRC28Q86X40 367 aaPredicted RBP13.96□□□□□ -0.17
NEK9-204ENST00000554258 OR10H4Q8NGA5 316 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 SLC7A6Q92536 515 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 TMEM80Q96HE8 168 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 KCNJ15Q99712 375 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 NIPAL2Q9H841 368 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 TMEM165Q9HC07 324 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 CENPMQ9NSP4 180 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 ERVK13-1Q9NX77 482 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 SCN3BQ9NY72 215 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 MRM2Q9UI43 246 aaKnown RBP13.96□□□□□ -0.17
NEK9-204ENST00000554258 TPRKBQ9Y3C4 175 aa13.96□□□□□ -0.17
NEK9-204ENST00000554258 CSMD3Q7Z407 3707 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 PLSCR5A0PG75 271 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 ABHD16AO95870 558 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 IGHV3-13P01766 116 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 DBHP09172 617 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 ACSM4P0C7M7 580 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 LIMS3P0CW19 117 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 LIMS4P0CW20 117 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 CCL2P13500 99 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 WNT5AP41221 380 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 IER3P46695 156 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 FGF12P61328 243 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 BTG1P62324 171 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 KCTD20Q7Z5Y7 419 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 LYG1Q8N1E2 194 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 TBX5Q99593 518 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 TBCCD1Q9NVR7 557 aa13.95□□□□□ -0.18
NEK9-204ENST00000554258 PAK1IP1Q9NWT1 392 aaPredicted RBP13.95□□□□□ -0.18
NEK9-204ENST00000554258 DAPL1A0PJW8 107 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 C5orf49A4QMS7 147 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 METTL15A6NJ78 407 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 J3QW42 95 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 SRSF10O75494 262 aaKnown RBP13.94□□□□□ -0.18
NEK9-204ENST00000554258 CDK1P06493 297 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 H2BFMP0C1H6 154 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 TPTEP56180 551 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 ZMYND11Q15326 602 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 NSUN5P1Q3KNT7 163 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 DMRTC1Q5HYR2 192 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 DRAM2Q6UX65 266 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 PLEKHG7Q6ZR37 379 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 PRSS45Q7RTY3 260 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 KRT77Q7Z794 578 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 LHFPL3Q86UP9 236 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 CFHR4Q92496 578 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 SPTSSAQ969W0 71 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
NEK9-204ENST00000554258 DACT3Q96B18 629 aaPredicted RBP13.94□□□□□ -0.18
NEK9-204ENST00000554258 C4orf45Q96LM5 186 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 TBX15Q96SF7 602 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 MYCBPQ99417 103 aaPredicted RBP13.94□□□□□ -0.18
NEK9-204ENST00000554258 COPS4Q9BT78 406 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 CDCA4Q9BXL8 241 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 MROQ9BYG7 248 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 DPAGT1Q9H3H5 408 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 ELOVL3Q9HB03 270 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 CDH20Q9HBT6 801 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 TMEM106BQ9NUM4 274 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 ACOXLQ9NUZ1 547 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 EXOSC1Q9Y3B2 195 aaKnown RBP13.94□□□□□ -0.18
NEK9-204ENST00000554258 LRP12Q9Y561 859 aa13.94□□□□□ -0.18
NEK9-204ENST00000554258 KIR2DS1A0A191URI9 304 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 CEACAM18A8MTB9 384 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 PTGES3LE9PB15 166 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 F5H5K5 113 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 M0R135 149 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 APOC1P02654 83 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 IGLL1P15814 213 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 C21orf33P30042 268 aaPredicted RBP13.93□□□□□ -0.18
NEK9-204ENST00000554258 GABRA5P31644 462 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 RGS6P49758 472 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 ETV1P50549 477 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 UCP2P55851 309 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 IRF3Q14653 427 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 AHSA2Q719I0 299 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 NAA40Q86UY6 237 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 SYS1Q8N2H4 156 aa13.93□□□□□ -0.18
NEK9-204ENST00000554258 ZNF485Q8NCK3 441 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms