RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GPER1Q99527 375 aa12.38□□□□□ -0.43
SHMT2-210ENST00000553950 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 CLEC4MQ9H2X3 399 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-210ENST00000553950 LRP5LA4QPB2 252 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 TRIM64BA6NI03 449 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 A6NIN4 97 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 AIPO00170 330 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 CTAG2O75638 210 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 CYB5AP00167 134 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 PLAUP00749 431 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 UBBP0CG47 229 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 SSTR2P30874 369 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF93P35789 620 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-210ENST00000553950 CD200P41217 278 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 MXD1Q05195 221 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 TESK1Q15569 626 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 MSMPQ1L6U9 139 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 ASPHD2Q6ICH7 369 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 SFXN4Q6P4A7 337 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 DTX2Q86UW9 622 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 HPSE2Q8WWQ2 592 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 RNF167Q9H6Y7 350 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 PLGRKTQ9HBL7 147 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 GHRLQ9UBU3 117 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 POLDIP2Q9Y2S7 368 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 PMF1-BGLAPU3KQ54 211 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 TANC2Q9HCD6 1990 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 DOPEY2Q9Y3R5 2298 aa12.37□□□□□ -0.43
SHMT2-210ENST00000553950 IGKV1-9A0A0C4DH69 117 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 PQLC2LA1A4F0 135 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 C17orf100A8MU93 164 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 SLC17A2O00624 439 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 CD55P08174 381 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 MTCP1P56278 107 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 HNRNPA0Q13151 305 aaKnown RBP12.36□□□□□ -0.43
SHMT2-210ENST00000553950 SPCS2Q15005 226 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 KISS1Q15726 138 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 DGUOKQ16854 277 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 FOXB2Q5VYV0 432 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 TMEM200AQ86VY9 491 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 LRP11Q86VZ4 500 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 OR2Z1Q8NG97 314 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 LILRB1Q8NHL6 650 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-210ENST00000553950 TRMT10AQ8TBZ6 339 aaKnown RBP12.36□□□□□ -0.43
SHMT2-210ENST00000553950 DYNC2LI1Q8TCX1 351 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 NEUROG1Q92886 237 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 RNF170Q96K19 258 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 S100A13Q99584 98 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 UBTD1Q9HAC8 227 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 PCDHB16Q9NRJ7 776 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
SHMT2-210ENST00000553950 PLEKHB1Q9UF11 243 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-210ENST00000553950 IL19Q9UHD0 177 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 ROS1P08922 2347 aa12.36□□□□□ -0.43
SHMT2-210ENST00000553950 DSCAMO60469 2012 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 FAM230AA0A1W2PPH8 454 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ZSCAN5BA6NJL1 495 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF732B4DXR9 585 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 J3QT63 122 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 IFNL4K9M1U5 179 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 MLNRO43193 412 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 LILRA1O75019 489 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ADRA2CP18825 462 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 TNFRSF1AP19438 455 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 HTR2CP28335 458 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ALDH3B1P43353 468 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 GPM6AP51674 278 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 FAM189A2Q15884 450 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 RAB11BQ15907 218 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 SWI5Q1ZZU3 235 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 TMEM255AQ5JRV8 349 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 MZT2AQ6P582 158 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 SAXO1Q8IYX7 474 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ZSCAN4Q8NAM6 433 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-210ENST00000553950 OR10AD1Q8NGE0 317 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 OR52N4Q8NGI2 321 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 NPRL2Q8WTW4 380 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 ORAI1Q96D31 301 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 PSMG3-AS1Q96PY0 264 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 PKIBQ9C010 78 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 TPK1Q9H3S4 243 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 MSL2Q9HCI7 577 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 PTTG2Q9NZH5 202 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 STEAP1Q9UHE8 339 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 EDARQ9UNE0 448 aa12.35□□□□□ -0.43
SHMT2-210ENST00000553950 AK6Q9Y3D8 172 aaKnown RBP12.35□□□□□ -0.43
SHMT2-210ENST00000553950 SHISA3A0PJX4 238 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 ZNF780AO75290 641 aaPredicted RBP12.34□□□□□ -0.43
SHMT2-210ENST00000553950 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
SHMT2-210ENST00000553950 IGHV1-46P01743 117 aa12.34□□□□□ -0.43
SHMT2-210ENST00000553950 CD37P11049 281 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms