RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 PLAC9Q5JTB6 97 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 C3P1Q6ZMU1 363 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 RPRMLQ8N4K4 120 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 GMPPAQ96IJ6 420 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 NPAP1Q9NZP6 1156 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF629Q9UEG4 869 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF175Q9Y473 711 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 PTPRQQ9UMZ3 2332 aa11.04□□□□□ -0.64
VIPAS39-206ENST00000553888 ARPC1BO15143 372 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 ST8SIA5O15466 376 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 ECDO95905 644 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 MPGP29372 298 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 IGFBP7Q16270 282 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 PLEKHN1Q494U1 663 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 OR52W1Q6IF63 320 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 TFAP2EQ6VUC0 442 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 MDP1Q86V88 176 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 FJX1Q86VR8 437 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 PIGCQ92535 297 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 BCL2L2Q92843 193 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 C1QTNF5Q9BXJ0 243 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 ZNF221Q9UK13 617 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 ANKRD34BA5PLL1 514 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 METTL21EPA6NDL7 271 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 ZSCAN5BA6NJL1 495 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 OR6C65A6NJZ3 312 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 SS18L1O75177 396 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 CSN2P05814 226 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 MTCP1P56278 107 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 AQP3Q92482 292 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 DACT3Q96B18 629 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 C1QTNF6Q9BXI9 259 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 TMEM59Q9BXS4 323 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 TINAGL1Q9GZM7 467 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 PTTG3PQ9NZH4 202 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 KCNK7Q9Y2U2 307 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
VIPAS39-206ENST00000553888 HPXP02790 462 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 ANXA7P20073 488 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 TMEM50BP56557 158 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 AP3S2P59780 193 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 GK2Q14410 553 aaPredicted RBP11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 BHLHE23Q8NDY6 225 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 OR51S1Q8NGJ8 323 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 PTX4Q96A99 478 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 MED30Q96HR3 178 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 POM121L2Q96KW2 1035 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 C7orf50Q9BRJ6 194 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 GPR160Q9UJ42 338 aa11.02□□□□□ -0.64
VIPAS39-206ENST00000553888 LPLP06858 475 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 PSMB1P20618 241 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 WNT5AP41221 380 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 KIR2DL2P43627 348 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 FCN2Q15485 313 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 ST3GAL2Q16842 350 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 GSG1Q2KHT4 349 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 SPATA46Q5T0L3 261 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 FAM214BQ7L5A3 538 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 TRAPPC6BQ86SZ2 158 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 SPACA3Q8IXA5 215 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 OR10R2Q8NGX6 335 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 DKK4Q9UBT3 224 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 HEATR1Q9H583 2144 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 SSX5O60225 188 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 LILRA1O75019 489 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 NRASP01111 189 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 RAD52P43351 418 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 PCP4P48539 62 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 RRAS2P62070 204 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 ACSF3Q4G176 576 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 CLVS2Q5SYC1 327 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 CLEC2AQ6UVW9 174 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 IGFL3Q6UXB1 125 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF782Q6ZMW2 699 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 Q6ZS92 163 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 MOB3CQ70IA8 216 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 GABRG1Q8N1C3 465 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 OR56B2PQ8NGI1 322 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 C15orf40Q8WUR7 153 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 ARHGAP5-AS1Q96IT6 56 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 RADILQ96JH8 1075 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 SEC22CQ9BRL7 303 aa11.02□□□□□ -0.65
VIPAS39-206ENST00000553888 ZNF850A8MQ14 1090 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 ICMTO60725 284 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 TPOP07202 933 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 TMEM225BP0DP42 221 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 MGMTP16455 207 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 ZP1P60852 638 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 BTG1P62324 171 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 SEM1Q6ZVN7 128 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 SLC51BQ86UW2 128 aa11.01□□□□□ -0.65
VIPAS39-206ENST00000553888 PNLDC1Q8NA58 520 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms