RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 PMELP40967 661 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 RAB7AP51149 207 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 SNAP25P60880 206 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 DEFA6Q01524 100 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 SEMG2Q02383 582 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 SLC39A6Q13433 755 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 PRPSAP1Q14558 356 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 Q1RN00 199 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 OR10J3Q5JRS4 329 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 TMEM42Q69YG0 159 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 MED27Q6P2C8 311 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 CASP12Q6UXS9 341 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 SLC36A1Q7Z2H8 476 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 FAM220AQ7Z4H9 259 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 TMEM135Q86UB9 458 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 LRRC18Q8N456 261 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 OR9A2Q8NGT5 310 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 OR13D1Q8NGV5 346 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 OR10K1Q8NGX5 313 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 ITFG1Q8TB96 612 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 C16orf78Q8WTQ4 265 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 CHCHD10Q8WYQ3 142 aaPredicted RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 C11orf40Q8WZ69 217 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 EXOSC8Q96B26 276 aaKnown RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 C12orf43Q96C57 262 aaKnown RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 MRPL48Q96GC5 212 aaKnown RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 PGLYRP4Q96LB8 373 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 GPR22Q99680 433 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 C2orf88Q9BSF0 95 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 TMEM208Q9BTX3 173 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 SLC19A3Q9BZV2 496 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 DSN1Q9H410 356 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 UBE2ZQ9H832 354 aaPredicted RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 ACP6Q9NPH0 428 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 MCUBQ9NWR8 336 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 LSM7Q9UK45 103 aaKnown RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 HHLA2Q9UM44 414 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 C14orf166Q9Y224 244 aaKnown RBP2.91□□□□□ -1.94
TDP1-207ENST00000553617 FLVCR1Q9Y5Y0 555 aa2.91□□□□□ -1.94
TDP1-207ENST00000553617 IGLV8-61A0A075B6I0 122 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 IGKV3D-15A0A087WSY6 115 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 IGHV1OR21-1A0A087WYE8 117 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 IGHV7-81A0A0B4J1V7 117 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 PQLC2LA1A4F0 135 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 FAM231BA6NCW3 169 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 SMIM9A6NGZ8 99 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 LOC110117498-PIK3R3F6TDL0 507 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 KCNK1O00180 336 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 KPNA4O00629 521 aaPredicted RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 TXNDC9O14530 226 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RP2O75695 350 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 TRAPPC6AO75865 159 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 DCTN3O75935 186 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 TTC4O95801 387 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RLN2P04090 185 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 PCCAP05165 728 aaPredicted RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 LIMS3P0CW19 117 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 LIMS4P0CW20 117 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RBMY1CP0DJD4 496 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 OGNP20774 298 aaKnown RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 MDH2P40926 338 aaKnown RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 RFC3P40938 356 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 GLP1RP43220 463 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 MEOX2P50222 304 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RAB13P51153 203 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 CCR6P51684 374 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 STC1P52823 247 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 OR10A3P58181 314 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 TAS2R41P59536 307 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 GNG2P59768 71 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RPL31P62899 125 aaKnown RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 BTN3A2P78410 334 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 EGFEM1PQ0D2K5 195 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 TBC1D28Q2M2D7 210 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 C11orf71Q6IPW1 123 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 WDR74Q6RFH5 385 aaPredicted RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 PAMR1Q6UXH9 720 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 DNM1P46Q6ZS02 220 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 Q6ZT83 130 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 MRPL52Q86TS9 123 aaKnown RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 PPP1R27Q86WC6 154 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 RDH10Q8IZV5 341 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 BLIDQ8IZY5 108 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 METTL13Q8N6R0 699 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 MDS2Q8NDY4 140 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 KLHL30-AS1Q8NEE0 82 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 OR5B3Q8NH48 314 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 OR51F2Q8NH61 342 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 OR5K2Q8NHB8 316 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 SYNPRQ8TBG9 265 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 TCEAL3Q969E4 200 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 FGGYQ96C11 551 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 ZHX1-C8orf76Q96EF9 292 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 PAGE5Q96GU1 130 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 SIGLEC12Q96PQ1 595 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 MRPL45Q9BRJ2 306 aaKnown RBP2.9□□□□□ -1.95
TDP1-207ENST00000553617 PAXXQ9BUH6 204 aa2.9□□□□□ -1.95
TDP1-207ENST00000553617 YIPF3Q9GZM5 350 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms