RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ING4Q9UNL4 249 aa6.35□□□□□ -1.39
ATXN3-221ENST00000553498 N6AMT1Q9Y5N5 214 aa6.35□□□□□ -1.39
ATXN3-221ENST00000553498 FRYLO94915 3013 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 HEATR5AQ86XA9 2040 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 TRAV6A0A075B6T7 132 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 UBE2QL1A1L167 161 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM172BPA6NC97 362 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A10PA6NDY2 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A18PA6NE21 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A16PA6NEW6 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A20PA6NIJ5 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A8PA6NJQ4 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A7PA6NKC0 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A22PA8MWA6 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A12PA8MX19 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A5PA8MXJ8 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A23PA8MXZ1 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CREBL2O60519 120 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 GMDSO60547 372 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 RAB3DO95716 219 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CST4P01036 141 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 NRASP01111 189 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CRYABP02511 175 aaKnown RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 HOXD4P09016 255 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 DBHP09172 617 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A15PP0C7V4 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A13PP0C7W8 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A14PP0C7W9 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM90A24PP0C7X0 464 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 ANXA3P12429 323 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 HIST1H1DP16402 221 aaKnown RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAHP16930 419 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 NAT1P18440 290 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CCR6P51684 374 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 ATP1B3P54709 279 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 GNG2P59768 71 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 RAB1AP62820 205 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM3AP98173 230 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAPQ12884 760 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 PLA2G7Q13093 441 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 GUSBP1Q15486 140 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 UBE2V2Q15819 145 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CARTPTQ16568 116 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 SNAI3Q3KNW1 292 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 RNASE12Q5GAN4 147 aaKnown RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 PLXDC2Q6UX71 529 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 GLDNQ6ZMI3 551 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 ZNF782Q6ZMW2 699 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 NUFIP2Q7Z417 695 aaKnown RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 BIVMQ86UB2 503 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 NOXA1Q86UR1 476 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 SAXO1Q8IYX7 474 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 C17orf78Q8N4C9 275 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 ARRDC1Q8N5I2 433 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 SPICQ8N5J4 248 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 CHST4Q8NCG5 386 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 OR1K1Q8NGR3 316 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 OR6K3Q8NGY3 331 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 AKR7LQ8NHP1 331 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 TNFAIP8L1Q8WVP5 186 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 BORCS8Q96FH0 119 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 SCGB3A2Q96PL1 93 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 GAL3ST1Q99999 423 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 METTL9Q9H1A3 318 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 RHOFQ9HBH0 211 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 FAM86C1Q9NVL1 165 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 HSF4Q9ULV5 492 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 EDARQ9UNE0 448 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 NOP16Q9Y3C1 178 aaKnown RBP6.34□□□□□ -1.39
ATXN3-221ENST00000553498 LIPGQ9Y5X9 500 aa6.34□□□□□ -1.39
ATXN3-221ENST00000553498 PI4KAP42356 2102 aa6.34□□□□□ -1.4
ATXN3-221ENST00000553498 MEIKINA0A087WXM9 373 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 E9PLN8 166 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 SSNA1O43805 119 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CRTAPO75718 401 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MPIG6BO95866 241 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CSTBP04080 98 aaKnown RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CD3DP04234 171 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 TPOP07202 933 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 SULT1A3P0DMM9 295 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 SULT1A4P0DMN0 295 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MGMTP16455 207 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 WT1P19544 449 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 APLNRP35414 380 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 ECI1P42126 302 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 OR3A4PP47883 348 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 VEGFCP49767 419 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 GZMKP49863 264 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MTCP1P56278 107 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 TAS2R46P59540 309 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 MRPS15P82914 257 aaKnown RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CD300CQ08708 224 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 CBX3Q13185 183 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 LINC00303Q3SY05 128 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 RNASE10Q5GAN6 216 aaKnown RBP6.33□□□□□ -1.4
ATXN3-221ENST00000553498 VAX1Q5SQQ9 334 aa6.33□□□□□ -1.4
ATXN3-221ENST00000553498 SFRP5Q5T4F7 317 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms