RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 KRTAP10-11P60412 298 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 MXRA7P84157 204 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 COL10A1Q03692 680 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 EMX1Q04741 257 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-219ENST00000553488 DGUOKQ16854 277 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 GFOD2Q3B7J2 385 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 DNM1P34Q6PK57 102 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 DPY19L2P2Q6ZN68 376 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 ZNF788Q6ZQV5 615 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 Q6ZSN1 163 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 OR1M1Q8NGA1 313 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 SPSB4Q96A44 273 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 RAB3IPQ96QF0 476 aaPredicted RBP5.87□□□□□ -1.47
ATXN3-219ENST00000553488 B9D2Q9BPU9 175 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 NDEL1Q9GZM8 345 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 DNTTIP1Q9H147 329 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 ANKRD19PQ9H560 264 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 TMBIM4Q9HC24 238 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 TMEM5Q9Y2B1 443 aa5.87□□□□□ -1.47
ATXN3-219ENST00000553488 VGLL3A8MV65 326 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 SIGLEC5O15389 551 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 RPS27P42677 84 aaKnown RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 CENPAP49450 140 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 RPS6KA3P51812 740 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 CAV3P56539 151 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 MZT1Q08AG7 82 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 EGFEM1PQ0D2K5 195 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 CYLC2Q14093 348 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 SEC23BQ15437 767 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 TMEM95Q3KNT9 176 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 LRRC10Q5BKY1 277 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 COQ5Q5HYK3 327 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 PGBD2Q6P3X8 592 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 DRAM2Q6UX65 266 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 LNX2Q8N448 690 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 OR2T12Q8NG77 320 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 OR5T2Q8NGG2 359 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 ANGPTL6Q8NI99 470 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 H1FXQ92522 213 aaKnown RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 NMNAT3Q96T66 252 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 SH3GL1Q99961 368 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 CDCA4Q9BXL8 241 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 FAM234AQ9H0X4 552 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 WDR13Q9H1Z4 485 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 FN3KQ9H479 309 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 OPA3Q9H6K4 179 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 PPP1R3EQ9H7J1 279 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 ELL3Q9HB65 397 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 RPRD1BQ9NQG5 326 aaKnown RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 SLC25A10Q9UBX3 287 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-219ENST00000553488 TCF19Q9Y242 345 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 CAPN7Q9Y6W3 813 aa5.86□□□□□ -1.47
ATXN3-219ENST00000553488 hCG_38984A0A1B0GV85 526 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 A0A1W2PQ09 198 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 A0A1W2PRQ8 180 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR6C68A6NDL8 312 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 UNC119BA6NIH7 251 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 NKX6-3A6NJ46 265 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 CDIPTO14735 213 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 MRASO14807 208 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ARPC3O15145 178 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ANGPTL7O43827 346 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 TIPRLO75663 272 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SLC2A1P11166 492 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 HIST1H1CP16403 213 aaKnown RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 GRK5P34947 590 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 MSX2P35548 267 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 FAM3AP98173 230 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 DGCR6Q14129 220 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SLC36A3Q495N2 470 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 IFI44LQ53G44 452 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 KLHL12Q53G59 568 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SMARCD3Q6STE5 483 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SLC16A9Q7RTY1 509 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 DPY19L4Q7Z388 723 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ZDHHC21Q8IVQ6 265 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 DYNAPQ8N1N2 210 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 C11orf42Q8N5U0 333 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR5D13Q8NGL4 314 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR9Q1Q8NGQ5 310 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR10Z1Q8NGY1 313 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR2AJ1Q8NGZ0 328 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR8S1Q8NH09 359 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 OR4K13Q8NH42 304 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 FANK1Q8TC84 345 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 LZICQ8WZA0 190 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SPTSSAQ969W0 71 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 DUS3LQ96G46 650 aaKnown RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ERMAPQ96PL5 475 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 DDOQ99489 341 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 NKX3-1Q99801 234 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 FUZQ9BT04 418 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 FGF23Q9GZV9 251 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-219ENST00000553488 SNTG1Q9NSN8 517 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 HAO2Q9NYQ3 351 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 KCNG2Q9UJ96 466 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ZNF391Q9UJN7 358 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ZNF222Q9UK12 451 aa5.85□□□□□ -1.47
ATXN3-219ENST00000553488 ENPP4Q9Y6X5 453 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms