RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 ZNF823P16415 610 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 GLRA1P23415 457 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 CEBPDP49716 269 aaPredicted RBP10.3□□□□□ -0.76
VPS29-211ENST00000553128 CAPZA1P52907 286 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 TIGD6Q17RP2 521 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 GFOD2Q3B7J2 385 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 CD177Q8N6Q3 437 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 OR51L1Q8NGJ5 315 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 FANK1Q8TC84 345 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 SLAMF6Q96DU3 332 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 MALSU1Q96EH3 234 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 SDSLQ96GA7 329 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 SH3GL1Q99961 368 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 MICU1Q9BPX6 476 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 ZNF649Q9BS31 505 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 GPR61Q9BZJ8 451 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
VPS29-211ENST00000553128 ZNF850A8MQ14 1090 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 ARPC3O15145 178 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 LPLP06858 475 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 ANXA2P07355 339 aaKnown RBP10.29□□□□□ -0.76
VPS29-211ENST00000553128 CD24P25063 80 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 ACKR3P25106 362 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 CX3CR1P49238 355 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 THBS3P49746 956 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 DYNLT3P51808 116 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 SLC7A2P52569 658 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 DLX6P56179 175 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 PRDX4Q13162 271 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 IFI44LQ53G44 452 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 FAM76BQ5HYJ3 339 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 FGD3Q5JSP0 725 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 SLC35F1Q5T1Q4 408 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 KCTD8Q6ZWB6 473 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 PRSS45Q7RTY3 260 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 OR2T12Q8NG77 320 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 OR4X2Q8NGF9 303 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 OR5P3Q8WZ94 311 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 FOXRED1Q96CU9 486 aaPredicted RBP10.29□□□□□ -0.76
VPS29-211ENST00000553128 HSH2DQ96JZ2 352 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 RTL8AQ9BWD3 113 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 PARD6BQ9BYG5 372 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 OR52D1Q9H346 318 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 ANKRD19PQ9H560 264 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 USE1Q9NZ43 259 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 KCNG2Q9UJ96 466 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 TBL2Q9Y4P3 447 aaKnown RBP10.29□□□□□ -0.76
VPS29-211ENST00000553128 LRP12Q9Y561 859 aa10.29□□□□□ -0.76
VPS29-211ENST00000553128 HERC2O95714 4834 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 A0A1W2PRQ8 180 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 FAM90A22PA8MWA6 464 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 H1F0P07305 194 aaKnown RBP10.28□□□□□ -0.76
VPS29-211ENST00000553128 SPARCP09486 303 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 LYL1P12980 280 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 DGCR6Q14129 220 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 TAF13Q15543 124 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 ABCA11PQ4W5N1 156 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 ZNF626Q68DY1 528 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 FAM57BQ71RH2 274 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 THAP5Q7Z6K1 395 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 CPLX4Q7Z7G2 160 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 OR2T27Q8NH04 317 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 RNF170Q96K19 258 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 IFT27Q9BW83 186 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 ENPP4Q9Y6X5 453 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 COMMD3-BMI1R4GMX3 469 aa10.28□□□□□ -0.76
VPS29-211ENST00000553128 PCLOQ9Y6V0 5065 aa10.27□□□□□ -0.76
VPS29-211ENST00000553128 RFPL4AA6NLU0 287 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 TMEM210A6NLX4 147 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 ANXA2P2A6NMY6 339 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 RFPL4AL1F8VTS6 287 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 MRASO14807 208 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 DIRAS1O95057 198 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 PIPP12273 146 aaPredicted RBP10.27□□□□□ -0.77
VPS29-211ENST00000553128 SLC6A6P31641 620 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 ENTPD1P49961 510 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 GPM6AP51674 278 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 LUMP51884 338 aaPredicted RBP10.27□□□□□ -0.77
VPS29-211ENST00000553128 SLC34A1Q06495 639 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.27□□□□□ -0.77
VPS29-211ENST00000553128 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 UNQ9370/PRO34162Q6UXP9 181 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 FKBP9P1Q75LS8 142 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 CBLL1Q75N03 491 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 KRT77Q7Z794 578 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 CROCCP2Q86T23 111 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 OR52H1Q8NGJ2 320 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 OR4C15Q8NGM1 316 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 OR52J3Q8NH60 311 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 BCAS4Q8TDM0 211 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 PIGCQ92535 297 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 DUX3Q96PT4 197 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 FUZQ9BT04 418 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 MCRIP2Q9BUT9 160 aaKnown RBP10.27□□□□□ -0.77
VPS29-211ENST00000553128 BRD7Q9NPI1 651 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 CMTM6Q9NX76 183 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 DNAJC27Q9NZQ0 273 aa10.27□□□□□ -0.77
VPS29-211ENST00000553128 FRAS1Q86XX4 4008 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms