RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ROM1Q03395 351 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 PDCD1Q15116 288 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 MPPED2Q15777 294 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 KCNJ8Q15842 424 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 C11orf91Q3C1V1 193 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 SNAI3Q3KNW1 292 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 TTC23Q5W5X9 447 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF322Q6U7Q0 402 aaPredicted RBP9.81□□□□□ -0.84
CKAP4-202ENST00000552828 IZUMO2Q6UXV1 221 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 FAM57BQ71RH2 274 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 MRPL21Q7Z2W9 205 aaKnown RBP9.81□□□□□ -0.84
CKAP4-202ENST00000552828 ENTHD1Q8IYW4 607 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF679Q8IYX0 411 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 OR2T27Q8NH04 317 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 CYGBQ8WWM9 190 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 DYRK2Q92630 601 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 OR8B4Q96RC9 309 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 TBX15Q96SF7 602 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 FAM192AQ9GZU8 254 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 SLC22A4Q9H015 551 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 OR10A2Q9H208 303 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 BRD7Q9NPI1 651 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 IKZF2Q9UKS7 526 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 COPS3Q9UNS2 423 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 LRP12Q9Y561 859 aa9.81□□□□□ -0.84
CKAP4-202ENST00000552828 DPPA5A6NC42 116 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 PSMD9O00233 223 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 TIMM23O14925 209 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 NDUFA2O43678 99 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 CLPXO76031 633 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 TOX4O94842 621 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 GABRB1P18505 474 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 DCTDP32321 178 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 RIDAP52758 137 aaKnown RBP9.8□□□□□ -0.84
CKAP4-202ENST00000552828 CXCR4P61073 352 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF92Q03936 586 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 EGR3Q06889 387 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 TIGD6Q17RP2 521 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 GLYATL3Q5SZD4 288 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 RUSC1-AS1Q66K80 236 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 ASPHD2Q6ICH7 369 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 PRSS45Q7RTY3 260 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 DHRSXQ8N5I4 330 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 C19orf18Q8NEA5 215 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 OR10H4Q8NGA5 316 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 OR2AE1Q8NHA4 323 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
CKAP4-202ENST00000552828 GATAD2BQ8WXI9 593 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 SGK3Q96BR1 496 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 RNFT2Q96EX2 444 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 PGAM5Q96HS1 289 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 WDFY2Q96P53 400 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 PCGF1Q9BSM1 259 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 RGCCQ9H4X1 137 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 OPA3Q9H6K4 179 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 TNFRSF19Q9NS68 423 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 ACOXLQ9NUZ1 547 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 ERVK-18Q9QC07 812 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 RNF7Q9UBF6 113 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 CTSZQ9UBR2 303 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 AASSQ9UDR5 926 aa9.8□□□□□ -0.84
CKAP4-202ENST00000552828 NOP16Q9Y3C1 178 aaKnown RBP9.8□□□□□ -0.84
CKAP4-202ENST00000552828 IGHV1-69DA0A0B4J2H0 117 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 TMEM269A0A1B0GVZ9 245 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 A0A1W2PQL4 384 aaPredicted RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 C5orf63A6NC05 138 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 ACOD1A6NK06 481 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 CD300LBA8K4G0 201 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 LGALS8O00214 317 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 GMDSO60547 372 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 APOL3O95236 402 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 IGHV1-69P01742 117 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 KRT8P05787 483 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 CFL1P23528 166 aaKnown RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PRSS12P56730 875 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PROK1P58294 105 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PSMA6P60900 246 aaKnown RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 ADARB1P78563 741 aaKnown RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 IL5RAQ01344 420 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF829Q3KNS6 432 aaPredicted RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PRAMEF6Q5VXH4 476 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 LDLRAD3Q86YD5 345 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PNLDC1Q8NA58 520 aaKnown RBP9.79□□□□□ -0.84
CKAP4-202ENST00000552828 SETD9Q8NE22 299 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 LINC01006Q8NI28 216 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 TBC1D15Q8TC07 691 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 SPSB4Q96A44 273 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 REEP6Q96HR9 211 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 TBX5Q99593 518 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 ADI1Q9BV57 179 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 TTTY10Q9BZA0 68 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 SIRPDQ9H106 197 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 FN3KRPQ9HA64 309 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 TRIM36Q9NQ86 728 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 UFSP2Q9NUQ7 469 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 RNF114Q9Y508 228 aa9.79□□□□□ -0.84
CKAP4-202ENST00000552828 PRR32B1ATL7 298 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms