RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 OR4A4PQ8NGN8 299 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR13C4Q8NGS5 318 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 OR2L8Q8NGY9 312 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 IMP4Q96G21 291 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 PRRC1Q96M27 445 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 RBM4BQ9BQ04 359 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 TM2D1Q9BX74 207 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 CDC42EP4Q9H3Q1 356 aaKnown RBP2.95□□□□□ -1.94
LIMA1-208ENST00000551691 RGCCQ9H4X1 137 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 ADAP2Q9NPF8 381 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 PTTG3PQ9NZH4 202 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 PCYOX1Q9UHG3 505 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 CFAP45Q9UL16 551 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 TBC1D24Q9ULP9 559 aa2.95□□□□□ -1.94
LIMA1-208ENST00000551691 GOLGA6L4A6NEF3 574 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 OR5B21A6NL26 309 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 IQCF5A8MTL0 148 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 E7EQL1 145 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 SCAMP2O15127 329 aaKnown RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 AKR7A2O43488 359 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 GPX5O75715 221 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 NSA2O95478 260 aaKnown RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 OTCP00480 354 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 MBP02144 154 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 GAPDHP04406 335 aaKnown RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 MYL2P10916 166 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 KITLGP21583 273 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 GSK3BP49841 420 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 RAB10P61026 200 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 BSPH1Q075Z2 132 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 CD47Q08722 323 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 CYLC2Q14093 348 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 RCAN2Q14206 197 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 EXOC3L4Q17RC7 722 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 TIGITQ495A1 244 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 CCDC122Q5T0U0 273 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 NCMAPQ5T1S8 102 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF658Q5TYW1 1059 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 AADACL4Q5VUY2 407 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 SLC22A10Q63ZE4 541 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 NCBP2-AS2Q69YL0 99 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 C11orf71Q6IPW1 123 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 DNAJC24Q6P3W2 148 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 REG3GQ6UW15 175 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 VN1R4Q7Z5H5 301 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 KLHDC8BQ8IXV7 354 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 PIANPQ8IYJ0 282 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 FTMTQ8N4E7 242 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 TPRX1Q8N7U7 411 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 OR10G3Q8NGC4 313 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 ZPLD1Q8TCW7 415 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 LKAAEAR1Q8TD35 194 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 ADAMTS16Q8TE57 1224 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 GPX8Q8TED1 209 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 PYROXD1Q8WU10 500 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 LRRC39Q96DD0 335 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 C1orf147Q96MC9 270 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 PRAP1Q96NZ9 151 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 LITAFQ99732 161 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 GAL3ST1Q99999 423 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 ACTR6Q9GZN1 396 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 MRPL47Q9HD33 250 aaKnown RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 SCRT2Q9NQ03 307 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 KCNIP1Q9NZI2 227 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 SOX21Q9Y651 276 aaPredicted RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 PLCE1Q9P212 2302 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
LIMA1-208ENST00000551691 HEATR5BQ9P2D3 2071 aa2.94□□□□□ -1.94
LIMA1-208ENST00000551691 TRAV9-2A0A087WT02 112 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 LOC100131303A0A0U1RQF7 123 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 LOC285095A0A1B0GVY8 99 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 SHISA9B4DS77 424 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 TEX46H3BTG2 121 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 OR1I1O60431 355 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 SLC2A10O95528 541 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 YEATS4O95619 227 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 HPNP05981 417 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 C2P06681 752 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 UBTFL6P0CB48 400 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-208ENST00000551691 RBMY1CP0DJD4 496 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 GSTM3P21266 225 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 ATP6V1B2P21281 511 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 MSR1P21757 451 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 CCR7P32248 378 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 BMI1P35226 326 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 GSSP48637 474 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 KLK7P49862 253 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 CDK9P50750 372 aaKnown RBP2.93□□□□□ -1.94
LIMA1-208ENST00000551691 EFNA4P52798 201 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 LIM2P55344 173 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 RAB11AP62491 216 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 MRPS22P82650 360 aaKnown RBP2.93□□□□□ -1.94
LIMA1-208ENST00000551691 LRRC63Q05C16 580 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 RAB11BQ15907 218 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 NRF1Q16656 503 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 C17orf58Q2M2W7 97 aa2.93□□□□□ -1.94
LIMA1-208ENST00000551691 ZNF791Q3KP31 576 aaPredicted RBP2.93□□□□□ -1.94
LIMA1-208ENST00000551691 SLC22A6Q4U2R8 563 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms