RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CCDC124Q96CT7 223 aaKnown RBP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 CEP19Q96LK0 163 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 CHID1Q9BWS9 393 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 C20orf85Q9H1P6 137 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 FBXO44Q9H4M3 255 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 ASF1BQ9NVP2 202 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 VNN3Q9NY84 501 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 TBC1D24Q9ULP9 559 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 PUS1Q9Y606 427 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPSF6-206ENST00000550987 MYOFQ9NZM1 2061 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 SEC16AO15027 2179 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
CPSF6-206ENST00000550987 GOLGA8QA0A0J9YX86 632 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 FAM168BA1KXE4 195 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 SIRPB1O00241 398 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 PHOX2AO14813 284 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 RAD51BO15315 384 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 PIN1P1O15428 100 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 HCRTR1O43613 425 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 GIPP09681 153 aaPredicted RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CCL2P13500 99 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CCNB1P14635 433 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 GABRG2P18507 467 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CD40LGP29965 261 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 PPP1R2P41236 205 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CEBPGP53567 150 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 APOC4P55056 127 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 DLX1P56177 255 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 POLR2GP62487 172 aaKnown RBP eCLIP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 IFFO1Q0D2I5 559 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 NSDHLQ15738 373 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 SLC1A5Q15758 541 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 DEFB109BQ30KR1 87 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 DNAL1Q4LDG9 190 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 BEX5Q5H9J7 111 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 SOHLH1Q5JUK2 328 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 LY6G6FQ5SQ64 297 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 UTF1Q5T230 341 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 SDHAF4Q5VUM1 108 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 PPP1R2P3Q6NXS1 205 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 TMEM220Q6QAJ8 160 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 NDUFAF7Q7L592 441 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 P2RY8Q86VZ1 359 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 C14orf178Q8N769 122 aaPredicted RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF557Q8N988 423 aaPredicted RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 ACBD4Q8NC06 268 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 OR5T3Q8NGG3 340 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 MRAPQ8TCY5 172 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 ACOT11Q8WXI4 607 aaPredicted RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 UCN3Q969E3 161 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 OR51M1Q9H341 326 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CSNK1G1Q9HCP0 422 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CALYQ9NYX4 217 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 LSM7Q9UK45 103 aaKnown RBP3.88□□□□□ -1.79
CPSF6-206ENST00000550987 NUMA1Q14980 2115 aa3.88□□□□□ -1.79
CPSF6-206ENST00000550987 CACNA1CQ13936 2221 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF638Q14966 1978 aaKnown RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 A0A0A6YYH2 397 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 LCE6AA0A183 80 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 OR6C70A6NIJ9 312 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 A6NJ64 397 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 SMIM23A6NLE4 172 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 A8MUA0 341 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 CDC7O00311 574 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ITGB1BP1O14713 200 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 APODP05090 189 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 P0C879 139 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 GPR6P46095 362 aaPredicted RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 S100A12P80511 92 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 IGLV3-21P80748 117 aaPredicted RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ACVR1Q04771 509 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 KRTAP1-1Q07627 177 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 CDC20Q12834 499 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 STX5Q13190 355 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ZBTB6Q15916 424 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 CHRFAM7AQ494W8 412 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ANKRD26P1Q6NSI1 321 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF774Q6NX45 483 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 PRSS41Q7RTY9 318 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 RBM45Q8IUH3 476 aaKnown RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 PQLC3Q8N755 202 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 SNX31Q8N9S9 440 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 OR8J2Q8NGG1 315 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 OR5B3Q8NH48 314 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ZNF502Q8TBZ5 544 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 MRGPRFQ96AM1 343 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 C16orf74Q96GX8 76 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 RIOK2Q9BVS4 552 aaKnown RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ANGPTL4Q9BY76 406 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 DRC3Q9H069 523 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 RACGAP1Q9H0H5 632 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 ELOVL6Q9H5J4 265 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 UGT1A10Q9HAW8 530 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 NTN4Q9HB63 628 aa3.87□□□□□ -1.79
CPSF6-206ENST00000550987 MRPS30Q9NP92 439 aaKnown RBP3.87□□□□□ -1.79
CPSF6-206ENST00000550987 GPATCH2LQ9NWQ4 482 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms