RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 PAICSP22234 425 aaKnown RBP10.49□□□□□ -0.73
PTCH1-221ENST00000550914 ACKR3P25106 362 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 EFNB2P52799 333 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 DLX1P56177 255 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 FBLN7Q53RD9 439 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 KPRPQ5T749 579 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-221ENST00000550914 OR2T5Q6IEZ7 315 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 ZDHHC23Q8IYP9 409 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 DEFB107AQ8IZN7 70 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 OR2T29Q8NH02 315 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 OTOSQ8NHW6 89 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 CFHR4Q92496 578 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 DUS3LQ96G46 650 aaKnown RBP10.49□□□□□ -0.73
PTCH1-221ENST00000550914 RNF170Q96K19 258 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 AMELYQ99218 206 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 REEP1Q9H902 201 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 BRD7Q9NPI1 651 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 SNTG1Q9NSN8 517 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF281Q9Y2X9 895 aa10.49□□□□□ -0.73
PTCH1-221ENST00000550914 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 DSCAML1Q8TD84 2053 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 A0A1W2PRD5 423 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 A0A1W2PRF3 423 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 A0A1W2PRM7 423 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 FAM183AA6NL82 134 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 ATP6V1B2P21281 511 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 POU1F1P28069 291 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 GMFBP60983 142 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-221ENST00000550914 BEAN1Q3B7T3 259 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 HCP5Q6MZN7 132 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 CYP2R1Q6VVX0 501 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 LIAT1Q6ZQX7 453 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 KCTD8Q6ZWB6 473 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 PNKDQ8N490 385 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 TEX47Q8TBZ9 253 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 PIGCQ92535 297 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 SSX3Q99909 188 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 MUC13Q9H3R2 512 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 MED20Q9H944 212 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF222Q9UK12 451 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 SAMHD1Q9Y3Z3 626 aaKnown RBP10.48□□□□□ -0.73
PTCH1-221ENST00000550914 LRP12Q9Y561 859 aa10.48□□□□□ -0.73
PTCH1-221ENST00000550914 IGKV1D-17A0A075B6S4 117 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 TCRBV5S2A0A599 114 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 ARRDC5A6NEK1 342 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 ACOD1A6NK06 481 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 H0YAE9 185 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 PRODHO43272 600 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 PSG2P11465 335 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 GLRA1P23415 457 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 GPM6AP51674 278 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 MNAT1P51948 309 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 PSMA6P60900 246 aaKnown RBP10.47□□□□□ -0.73
PTCH1-221ENST00000550914 GNG3P63215 75 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
PTCH1-221ENST00000550914 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 CRIP3Q6Q6R5 217 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 ARHGAP24Q8N264 748 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 OR5K1Q8NHB7 308 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 PPP1R35Q8TAP8 253 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 SDSLQ96GA7 329 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 FGF23Q9GZV9 251 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-221ENST00000550914 FAM107BQ9H098 131 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 OR51I2Q9H344 312 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 VNN3Q9NY84 501 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 RASL12Q9NYN1 266 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 U3KQV3 271 aa10.47□□□□□ -0.73
PTCH1-221ENST00000550914 A0A0U1RQV5 110 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 A0A1W2PPH5 198 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 PRR23D1E9PI22 279 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-221ENST00000550914 H3BN98 237 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 ANGPTL7O43827 346 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 PRR23D2P0DMB1 279 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-221ENST00000550914 ATP6V1B1P15313 513 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 MAP2K3P46734 347 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 GABRA2P47869 451 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 CEACAM21Q3KPI0 293 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 FAM98BQ52LJ0 330 aaKnown RBP10.46□□□□□ -0.73
PTCH1-221ENST00000550914 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 LCN8Q6JVE9 175 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 ZNRF1Q8ND25 227 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 TMEM185AQ8NFB2 350 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 OR10G2Q8NGC3 310 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 THEM6Q8WUY1 208 aa10.46□□□□□ -0.73
PTCH1-221ENST00000550914 PPP1R14AQ96A00 147 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms