RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 CA6P23280 308 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 CPT2P23786 658 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 BLVRAP53004 296 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ERVFRD-1P60508 538 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 HOXA4Q00056 320 aaPredicted RBP5.54□□□□□ -1.52
TMEM116-208ENST00000549537 CDK5Q00535 292 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 PAX8Q06710 450 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ZNF154Q13106 437 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 SCGB2A2Q13296 93 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 MED22Q15528 200 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 MPPED2Q15777 294 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ZNF404Q494X3 552 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 KLHL12Q53G59 568 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 KRBOX4Q5JUW0 171 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 PET117Q6UWS5 81 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ZNF841Q6ZN19 808 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 RHOUQ7L0Q8 258 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 TIGD4Q8IY51 512 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 MUC20Q8N307 709 aaPredicted RBP5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ZDHHC22Q8N966 263 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 OR6K6Q8NGW6 343 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 NANPQ8TBE9 248 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 TEX47Q8TBZ9 253 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ZNF418Q8TF45 676 aaPredicted RBP5.54□□□□□ -1.52
TMEM116-208ENST00000549537 RNF133Q8WVZ7 376 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ERGIC1Q969X5 290 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 SLC6A7Q99884 636 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 TMEM246Q9BRR3 403 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 SPXQ9BT56 116 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 COPS4Q9BT78 406 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 NTN4Q9HB63 628 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 ESM1Q9NQ30 184 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 POMPQ9Y244 141 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 POMT1Q9Y6A1 747 aa5.54□□□□□ -1.52
TMEM116-208ENST00000549537 NOTCH1P46531 2555 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 hCG_1809904A0A1W2PP81 198 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 A0A1W2PPE2 198 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 A0A1W2PR64 198 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 GYG2O15488 501 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 GMDSO60547 372 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 FKBP6O75344 327 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 FCN3O75636 299 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 GLCEO94923 617 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PPIAL4GP0DN37 164 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PRKACGP22612 351 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SLC2A5P22732 501 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 CD80P33681 288 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 OPRL1P41146 370 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 CX3CR1P49238 355 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 COMPP49747 757 aaPredicted RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PRKXP51817 358 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 GRB2P62993 217 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 FAM3AP98173 230 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 EIF2B1Q14232 305 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 GINS1Q14691 196 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 DNAL1Q4LDG9 190 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 ESCO2Q56NI9 601 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PRAMEF6Q5VXH4 476 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 LYPD2Q6UXB3 125 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 MRPL21Q7Z2W9 205 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 WDR86Q86TI4 376 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 FAM90A1Q86YD7 464 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 KLBQ86Z14 1044 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 ERI1Q8IV48 349 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 CCDC28AQ8IWP9 274 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 C1orf87Q8N0U7 546 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 OR56B2PQ8NGI1 322 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 FAM216AQ8WUB2 273 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SPRYD4Q8WW59 207 aaPredicted RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SGK3Q96BR1 496 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 INTS14Q96SY0 518 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 ADAT1Q9BUB4 502 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 ABHD6Q9BV23 337 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SSBP3Q9BWW4 388 aaPredicted RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 TEX12Q9BXU0 123 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 CADM1Q9BY67 442 aaKnown RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SLC22A4Q9H015 551 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 SLC25A19Q9HC21 320 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 CENPMQ9NSP4 180 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PDP1Q9P0J1 537 aaPredicted RBP5.53□□□□□ -1.52
TMEM116-208ENST00000549537 ZNF319Q9P2F9 582 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 MIOXQ9UGB7 285 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 KLHDC2Q9Y2U9 406 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 PPIAL4AQ9Y536 164 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 AUP1Q9Y679 476 aa5.53□□□□□ -1.52
TMEM116-208ENST00000549537 TRAV34A0A0B4J273 112 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 IGHV2-70DA0A0C4DH43 119 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 hCG_38984A0A1B0GV85 526 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 TMEM89A2RUT3 159 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 FAM90A18PA6NE21 464 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 FAM90A16PA6NEW6 464 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 LRRC30A6NM36 301 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 FAM90A9PA6NNJ1 464 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 FAM90A5PA8MXJ8 464 aa5.52□□□□□ -1.53
TMEM116-208ENST00000549537 H3BN98 237 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms