RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 ZNF121P58317 390 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-218ENST00000548945 EGR3Q06889 387 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 FAM57BQ71RH2 274 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 BEND2Q8NDZ0 799 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 OR4Q3Q8NH05 313 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-218ENST00000548945 ITFG2Q969R8 447 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 SEH1LQ96EE3 360 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 DUS3LQ96G46 650 aaKnown RBP10.52□□□□□ -0.73
PTCH1-218ENST00000548945 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-218ENST00000548945 MEIOCA2RUB1 952 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 ANKRD61A6NGH8 418 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 CLUP10909 449 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 HOXB6P17509 224 aaKnown RBP10.51□□□□□ -0.73
PTCH1-218ENST00000548945 GABRA5P31644 462 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 KLRD1Q13241 179 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 BLMHQ13867 455 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 HERPUD1Q15011 391 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 AANATQ16613 207 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 SLC35E4Q6ICL7 350 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 CD300LDQ6UXZ3 194 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 KRT74Q7RTS7 529 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 ERI1Q8IV48 349 aaKnown RBP10.51□□□□□ -0.73
PTCH1-218ENST00000548945 DTX3Q8N9I9 347 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 AQP11Q8NBQ7 271 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 PAPD5Q8NDF8 572 aaKnown RBP10.51□□□□□ -0.73
PTCH1-218ENST00000548945 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 OR5D13Q8NGL4 314 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 OR6N2Q8NGY6 317 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 ANGPTL6Q8NI99 470 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 PYDC1Q8WXC3 89 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 OR5P3Q8WZ94 311 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 H1FXQ92522 213 aaKnown RBP10.51□□□□□ -0.73
PTCH1-218ENST00000548945 PGAM5Q96HS1 289 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 GAFA1Q96PS6 74 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 WDR13Q9H1Z4 485 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 PPP1R3EQ9H7J1 279 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 DNAJC27Q9NZQ0 273 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF319Q9P2F9 582 aa10.51□□□□□ -0.73
PTCH1-218ENST00000548945 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 TCRBV5S2A0A599 114 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 GLCEO94923 617 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 OPN1MWP04001 364 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 ACAA1P09110 424 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-218ENST00000548945 H2BFMP0C1H6 154 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 OPN1MW2P0DN77 364 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 OPN1MW3P0DN78 364 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 SELLP14151 372 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 GSTT1P30711 240 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 DCTDP32321 178 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 KIR2DS4P43632 304 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 PRDX4Q13162 271 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 GK3PQ14409 553 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 DGUOKQ16854 277 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 MICAQ29983 383 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 GFOD2Q3B7J2 385 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 Q6ZTK2 550 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-218ENST00000548945 TIGD4Q8IY51 512 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 RPL3LQ92901 407 aaKnown RBP10.5□□□□□ -0.73
PTCH1-218ENST00000548945 PPA2Q9H2U2 334 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 MAGIXQ9H6Y5 334 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 RANBP3Q9H6Z4 567 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-218ENST00000548945 RAB18Q9NP72 206 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 ARMC1Q9NVT9 282 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 NLKQ9UBE8 527 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 SF3B6Q9Y3B4 125 aaKnown RBP10.5□□□□□ -0.73
PTCH1-218ENST00000548945 MAB21L2Q9Y586 359 aa10.5□□□□□ -0.73
PTCH1-218ENST00000548945 A0A1W2PQ09 198 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 OR2AT4A6NND4 320 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF850A8MQ14 1090 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 H3BNX3 289 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 H3BUX3 64 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 AKR7A2O43488 359 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 SOX14O95416 240 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 LYNP07948 512 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 NDUFB7P17568 137 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 PAICSP22234 425 aaKnown RBP10.49□□□□□ -0.73
PTCH1-218ENST00000548945 ACKR3P25106 362 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 EFNB2P52799 333 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 DLX1P56177 255 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 FAM98BQ52LJ0 330 aaKnown RBP10.49□□□□□ -0.73
PTCH1-218ENST00000548945 FBLN7Q53RD9 439 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 KPRPQ5T749 579 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-218ENST00000548945 OR2T5Q6IEZ7 315 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 ZDHHC23Q8IYP9 409 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 ADGRG5Q8IZF4 528 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 OR4C13Q8NGP0 309 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 OR2T29Q8NH02 315 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 OTOSQ8NHW6 89 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 CANT1Q8WVQ1 401 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 CFHR4Q92496 578 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 RNF170Q96K19 258 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 AMELYQ99218 206 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 MEGF9Q9H1U4 602 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 NIPAL2Q9H841 368 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 REEP1Q9H902 201 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms