RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 IGKV3-11P04433 115 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 CCL3P10147 92 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 HIST1H1DP16402 221 aaKnown RBP12.52□□□□□ -0.4
CACNB3-209ENST00000548860 GALNSP34059 522 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 CARD18P57730 90 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 UNC119Q13432 240 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 OR2F1Q13607 317 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 PEA15Q15121 130 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 TGIF1Q15583 401 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 PDZD11Q5EBL8 140 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.52□□□□□ -0.4
CACNB3-209ENST00000548860 DRAM2Q6UX65 266 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 GJC3Q8NFK1 279 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF837Q96EG3 531 aaPredicted RBP12.52□□□□□ -0.4
CACNB3-209ENST00000548860 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 ZNF319Q9P2F9 582 aa12.52□□□□□ -0.4
CACNB3-209ENST00000548860 HSD17B6O14756 317 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 DXOO77932 396 aaKnown RBP12.52□□□□□ -0.41
CACNB3-209ENST00000548860 GNMTQ14749 295 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 OR10Z1Q8NGY1 313 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 ST8SIA1Q92185 356 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 AMDHD2Q9Y303 409 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 CLDN16Q9Y5I7 305 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 OR6C76A6NM76 312 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 CST7O76096 145 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 ONECUT2O95948 504 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 MSR1P21757 451 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 EFNA3P52797 238 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 SLC25A26Q70HW3 274 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 NOXO1Q8NFA2 376 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 SPACA9Q96E40 222 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-209ENST00000548860 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 NAA11Q9BSU3 229 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-209ENST00000548860 RCL1Q9Y2P8 373 aaKnown RBP12.52□□□□□ -0.41
CACNB3-209ENST00000548860 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
CACNB3-209ENST00000548860 KIF26AQ9ULI4 1882 aaPredicted RBP12.52□□□□□ -0.41
CACNB3-209ENST00000548860 FRYLO94915 3013 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 ZNF44P15621 663 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 CPT2P23786 658 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 PTGFRP43088 359 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 IGSF11Q5DX21 431 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 TRIM61Q5EBN2 209 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 WDFY1Q8IWB7 410 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 ZNF501Q96CX3 271 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 GPX7Q96SL4 187 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 PADI1Q9ULC6 663 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 PRR19A6NJB7 356 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 SHOXO15266 292 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 PET100P0DJ07 73 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 NOVA1P51513 510 aaKnown RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 TAS2R31P59538 309 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 HLA-BQ31612 363 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 OR2A2Q6IF42 318 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 ZNF695Q8IW36 515 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 FLVCR1Q9Y5Y0 555 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 OR2M5A3KFT3 312 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 RPL12P30050 165 aaKnown RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 SLC35A1P78382 337 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 C3AR1Q16581 482 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 TMEM128Q5BJH2 165 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 TMEM182Q6ZP80 229 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 G6PC2Q9NQR9 355 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 EXOSC3Q9NQT5 275 aaKnown RBP12.51□□□□□ -0.41
CACNB3-209ENST00000548860 ACACAQ13085 2346 aa12.51□□□□□ -0.41
CACNB3-209ENST00000548860 CHRM2P08172 466 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 SSR4P51571 173 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
CACNB3-209ENST00000548860 PIGYQ3MUY2 71 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 C17orf78Q8N4C9 275 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 METTL9Q9H1A3 318 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 P4HTMQ9NXG6 502 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 PLA2G3Q9NZ20 509 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 TRAV14DV4A0A0A6YYC5 116 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 DHHO43323 396 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 ITGB2P05107 769 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 CEACAM16Q2WEN9 425 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 ETV3LQ6ZN32 361 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 DOK3Q7L591 496 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 ZNF519Q8TB69 540 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 IFI44Q8TCB0 444 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 LIPHQ8WWY8 451 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 DNTTIP1Q9H147 329 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 LHFPL6Q9Y693 200 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 HMSDA8MTL9 139 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 PPIAP62937 165 aaKnown RBP12.5□□□□□ -0.41
CACNB3-209ENST00000548860 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
CACNB3-209ENST00000548860 SRSF3P84103 164 aaKnown RBP12.5□□□□□ -0.41
CACNB3-209ENST00000548860 COL19A1Q14993 1142 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 HAGHQ16775 308 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 RNF133Q8WVZ7 376 aa12.5□□□□□ -0.41
CACNB3-209ENST00000548860 OR10C1Q96KK4 312 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms