RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SCGB1D2O95969 90 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 HTR5AP47898 357 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 PNLDC1Q8NA58 520 aaKnown RBP20.37■□□□□ 0.85
NPAS3-206ENST00000548645 FAM71F1Q96KD3 344 aaPredicted RBP20.37■□□□□ 0.85
NPAS3-206ENST00000548645 SOX7Q9BT81 388 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 ATXN7L1Q9ULK2 861 aaPredicted RBP20.37■□□□□ 0.85
NPAS3-206ENST00000548645 NSG2Q9Y328 171 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 DOCK8Q8NF50 2099 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 ACY1Q03154 408 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 NCMAPQ5T1S8 102 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 OR8B12Q8NGG6 310 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 OR2AJ1Q8NGZ0 328 aa20.37■□□□□ 0.85
NPAS3-206ENST00000548645 DAZLQ92904 295 aaKnown RBP20.37■□□□□ 0.85
NPAS3-206ENST00000548645 STRAPQ9Y3F4 350 aaKnown RBP20.37■□□□□ 0.85
NPAS3-206ENST00000548645 EN2P19622 333 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 BLVRBP30043 206 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 CAPZBP47756 277 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 PPM1FP49593 454 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 BIDP55957 195 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 SLC35A1P78382 337 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 TMEM240Q5SV17 173 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 PPP1R3BQ86XI6 285 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 GINS3Q9BRX5 216 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 EMC6Q9BV81 110 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 COPS7AQ9UBW8 275 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 ARID1AO14497 2285 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 SERPINE3A8MV23 424 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 PRH1P02810 166 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 CTSDP07339 412 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 MYOGP15173 224 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 OR1D4P47884 311 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 ZNF239Q16600 458 aaKnown RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 OR2B11Q5JQS5 317 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 SEMA6DQ8NFY4 1073 aa20.36■□□□□ 0.85
NPAS3-206ENST00000548645 MRPL24Q96A35 216 aaKnown RBP20.36■□□□□ 0.85
NPAS3-206ENST00000548645 SLC2A1P11166 492 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 GNRHR2Q96P88 292 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 PECRQ9BY49 303 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 HPNP05981 417 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 P2RY1P47900 373 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 ARL6IP1Q15041 203 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 TTLL10Q6ZVT0 673 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 SLC25A43Q8WUT9 341 aaPredicted RBP20.35■□□□□ 0.85
NPAS3-206ENST00000548645 MESP1Q9BRJ9 268 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 TMEM106CQ9BVX2 250 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 PISDQ9UG56 409 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 LHFPL6Q9Y693 200 aa20.35■□□□□ 0.85
NPAS3-206ENST00000548645 CHD9Q3L8U1 2897 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 SPTY2D1-AS1A0A0U1RR47 76 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 ZNF121P58317 390 aaPredicted RBP20.34■□□□□ 0.85
NPAS3-206ENST00000548645 ZNF2Q9BSG1 426 aaPredicted RBP20.34■□□□□ 0.85
NPAS3-206ENST00000548645 FBXO7Q9Y3I1 522 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 CRYM-AS1A6NIL9 109 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 OR2C1O95371 312 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 ZNF17P17021 662 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 DOK3Q7L591 496 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 ST8SIA1Q92185 356 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 ZNF701Q9NV72 531 aaPredicted RBP20.34■□□□□ 0.85
NPAS3-206ENST00000548645 KLHL13Q9P2N7 655 aa20.34■□□□□ 0.85
NPAS3-206ENST00000548645 FOXI3A8MTJ6 420 aaPredicted RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 NME1P15531 152 aaKnown RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 HOXA5P20719 270 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 CHATP28329 748 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 FHITP49789 147 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 CLINT1Q14677 625 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 CLEC9AQ6UXN8 241 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 LFNGQ8NES3 379 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 SSC4DQ8WTU2 575 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 INTS12Q96CB8 462 aaKnown RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 TREM2Q9NZC2 230 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 PHF3Q92576 2039 aaKnown RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 MASP2O00187 686 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 KIAA0141Q14154 515 aaPredicted RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 FZD2Q14332 565 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 THEM4Q5T1C6 240 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 RTL6Q6ICC9 239 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 HEPN1Q6WQI6 88 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 SNIP1Q8TAD8 396 aaKnown RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 PHOSPHO2Q8TCD6 241 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.33■□□□□ 0.85
NPAS3-206ENST00000548645 SHDQ96IW2 340 aa20.33■□□□□ 0.85
NPAS3-206ENST00000548645 GPR137BO60478 399 aa20.33■□□□□ 0.84
NPAS3-206ENST00000548645 CCL1P22362 96 aa20.33■□□□□ 0.84
NPAS3-206ENST00000548645 GPR157Q5UAW9 335 aa20.33■□□□□ 0.84
NPAS3-206ENST00000548645 PFDN5Q99471 154 aa20.33■□□□□ 0.84
NPAS3-206ENST00000548645 UNC80Q8N2C7 3258 aa20.33■□□□□ 0.84
NPAS3-206ENST00000548645 SEMA4FO95754 770 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 MBPP02686 304 aaPredicted RBP20.32■□□□□ 0.84
NPAS3-206ENST00000548645 OR13C7P0DN81 318 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 APOBEC1P41238 236 aaKnown RBP20.32■□□□□ 0.84
NPAS3-206ENST00000548645 RPS23P62266 143 aaKnown RBP20.32■□□□□ 0.84
NPAS3-206ENST00000548645 PPA1Q15181 289 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 DDIT4LQ96D03 193 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 BSCL2Q96G97 398 aaPredicted RBP20.32■□□□□ 0.84
NPAS3-206ENST00000548645 WFDC1Q9HC57 220 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 ZNF319Q9P2F9 582 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 HDGFL3Q9Y3E1 203 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 IGKV1-9A0A0C4DH69 117 aa20.32■□□□□ 0.84
NPAS3-206ENST00000548645 RRP8O43159 456 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms