RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 CPT2P23786 658 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 MDH2P40926 338 aaKnown RBP11.55□□□□□ -0.56
PTCH1-217ENST00000548420 CDC42P60953 191 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 MPPED2Q15777 294 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 SLC35F2Q8IXU6 374 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 ZSCAN4Q8NAM6 433 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-217ENST00000548420 CSNK2A3Q8NEV1 391 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 OR8B12Q8NGG6 310 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 EME1Q96AY2 570 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 C9orf16Q9BUW7 83 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 MRI1Q9BV20 369 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 MROQ9BYG7 248 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 PATZ1Q9HBE1 687 aaKnown RBP11.55□□□□□ -0.56
PTCH1-217ENST00000548420 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 BRD7Q9NPI1 651 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 UBAP1Q9NZ09 502 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 U3KQK5 164 aa11.55□□□□□ -0.56
PTCH1-217ENST00000548420 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 TMEM269A0A1B0GVZ9 245 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 PSMD9O00233 223 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 PHYHO14832 338 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 CYB5R3P00387 301 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-217ENST00000548420 OR2T7P0C7T2 308 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 ACKR3P25106 362 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 CXCR4P61073 352 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 SNRPGP62308 76 aaKnown RBP11.54□□□□□ -0.56
PTCH1-217ENST00000548420 EGR3Q06889 387 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 POU4F2Q12837 409 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF684Q5T5D7 378 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF322Q6U7Q0 402 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-217ENST00000548420 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 SPICQ8N5J4 248 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 TMEM86BQ8N661 226 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 OR2T27Q8NH04 317 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 MBOAT4Q96T53 435 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 ADAT1Q9BUB4 502 aaKnown RBP11.54□□□□□ -0.56
PTCH1-217ENST00000548420 C16orf95Q9H693 158 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 NKX1-2Q9UD57 310 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-217ENST00000548420 ORC6Q9Y5N6 252 aa11.54□□□□□ -0.56
PTCH1-217ENST00000548420 IGHV3-64DA0A0J9YX35 117 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 ISPDA4D126 451 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 LRRC30A6NM36 301 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 ANKRD30BLA7E2S9 258 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 ZNF670-ZNF695F2Z2N8 137 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 FAM20BO75063 409 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 CST4P01036 141 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 LHBP01229 141 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 WNT2P09544 360 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 GABRB1P18505 474 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 RIDAP52758 137 aaKnown RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 KRTAP10-11P60412 298 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 MZT1Q08AG7 82 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 SNCBQ16143 134 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 ZIK1Q3SY52 487 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 PRAMEF6Q5VXH4 476 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 ZBTB49Q6ZSB9 765 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 Q6ZSR3 168 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 MUC20Q8N307 709 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 KLHL36Q8N4N3 616 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 DYRK2Q92630 601 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 RFKQ969G6 155 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 UPRTQ96BW1 309 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 APOL4Q9BPW4 351 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 PPP1R3EQ9H7J1 279 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 NUFIP1Q9UHK0 495 aaKnown RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 MRM2Q9UI43 246 aaKnown RBP11.53□□□□□ -0.56
PTCH1-217ENST00000548420 RHBDD3Q9Y3P4 386 aa11.53□□□□□ -0.56
PTCH1-217ENST00000548420 HUWE1Q7Z6Z7 4374 aaKnown RBP11.52□□□□□ -0.57
PTCH1-217ENST00000548420 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-217ENST00000548420 CEACAM18A8MTB9 384 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 A8MXK9 166 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 J3QRE1 110 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 DLGAP1O14490 977 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 TNFRSF13BO14836 293 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-217ENST00000548420 MAGEB4O15481 346 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-217ENST00000548420 XPNPEP2O43895 674 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 ATP6V1B1P15313 513 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 CFHR2P36980 270 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF404Q494X3 552 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 DMRTC1Q5HYR2 192 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 SSX6Q7RTT6 188 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 OR51G2Q8NGK0 314 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 TMEM246Q9BRR3 403 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 PBOV1Q9GZY1 135 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 TLNRD1Q9H1K6 362 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 NOX4Q9NPH5 578 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 UFSP2Q9NUQ7 469 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 C14orf119Q9NWQ9 140 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 RNF7Q9UBF6 113 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 MPC1Q9Y5U8 109 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 STARD9Q9P2P6 4700 aa11.52□□□□□ -0.57
PTCH1-217ENST00000548420 A0A1W2PQL4 384 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-217ENST00000548420 SLC16A6O15403 523 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms