RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ACTG2P63267 376 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
GCN1-202ENST00000547263 SLC34A1Q06495 639 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 TP53I3Q53FA7 332 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 KLHL22Q53GT1 634 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 FAM90A1Q86YD7 464 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 ZNF485Q8NCK3 441 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 SETD9Q8NE22 299 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 DEFB108BQ8NET1 73 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 PIGCQ92535 297 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 TFAP2CQ92754 450 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 C12orf43Q96C57 262 aaKnown RBP9.12□□□□□ -0.95
GCN1-202ENST00000547263 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
GCN1-202ENST00000547263 FAM71F1Q96KD3 344 aaPredicted RBP9.12□□□□□ -0.95
GCN1-202ENST00000547263 AMBNQ9NP70 447 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 PLCXD1Q9NUJ7 323 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 C1orf123Q9NWV4 160 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 OPN4Q9UHM6 478 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 ENPP5Q9UJA9 477 aa9.12□□□□□ -0.95
GCN1-202ENST00000547263 PQLC2LA1A4F0 135 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 P2RY10O00398 339 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 NOS1APO75052 506 aaPredicted RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 RPP14O95059 124 aaKnown RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 ZNF205O95201 554 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 GRPP07492 148 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 GNAO1P09471 354 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 PIPP12273 146 aaPredicted RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 IRF2P14316 349 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 MUC1P15941 1255 aaPredicted RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 DCKP27707 260 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 TGM4P49221 684 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 MRPL28Q13084 256 aaKnown RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 KCNJ8Q15842 424 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 CLVS2Q5SYC1 327 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 LYPD2Q6UXB3 125 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 FAM220AQ7Z4H9 259 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 SCCPDHQ8NBX0 429 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 CNIH3Q8TBE1 160 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 HAVCR2Q8TDQ0 301 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 RNF170Q96K19 258 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 C4orf36Q96KX1 117 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 MYCBPQ99417 103 aaPredicted RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 ALG8Q9BVK2 526 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 CHST5Q9GZS9 411 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 SHARPINQ9H0F6 387 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 DNTTIP1Q9H147 329 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 METTL17Q9H7H0 456 aaPredicted RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 ISG20L2Q9H9L3 353 aaKnown RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 MMP26Q9NRE1 261 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 FKBP14Q9NWM8 211 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 UBAP1Q9NZ09 502 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 GNG8Q9UK08 70 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 DIMT1Q9UNQ2 313 aaKnown RBP9.11□□□□□ -0.95
GCN1-202ENST00000547263 PIGLQ9Y2B2 252 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 INSIG2Q9Y5U4 225 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 WNK2Q9Y3S1 2297 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 SVEP1Q4LDE5 3571 aa9.11□□□□□ -0.95
GCN1-202ENST00000547263 CUBNO60494 3623 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 TRAV38-1A0A0B4J264 116 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 A0A0G2JMP0 313 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 A0A0X1KG70 313 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 LOC107986453A0A1B0GWG9 222 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 CDIPTO14735 213 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 NRASP01111 189 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 HNF1AP20823 631 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 CD80P33681 288 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 NPY4RP50391 375 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 ERVK11-1P61568 191 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 PAX8Q06710 450 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 RIPK1Q13546 671 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 ALKBH1Q13686 389 aaKnown RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 TMEM244Q5VVB8 128 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 WDR25Q64LD2 544 aaPredicted RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 STUMQ69YW2 141 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 UTS2BQ765I0 119 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 LHFPL3Q86UP9 236 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 OR4M2Q8NGB6 313 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 LRRC29Q8WV35 223 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 AQP3Q92482 292 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 RPL3LQ92901 407 aaKnown RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 DMRTB1Q96MA1 342 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 SSBP3Q9BWW4 388 aaPredicted RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 BEX2Q9BXY8 128 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 LPAR2Q9HBW0 351 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 HES4Q9HCC6 221 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 CNOT2Q9NZN8 540 aaKnown RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 ZNF222Q9UK12 451 aa9.1□□□□□ -0.95
GCN1-202ENST00000547263 CAB39Q9Y376 341 aaPredicted RBP9.1□□□□□ -0.95
GCN1-202ENST00000547263 IGKV1-9A0A0C4DH69 117 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 KIR2DS1A0A191URI9 304 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 A0A1B0GVI7 797 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 IRGMA1A4Y4 181 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 ANKRD61A6NGH8 418 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 A6NLC8 198 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 ZNF732B4DXR9 585 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 E9PI62 339 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 SYT7O43581 403 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 RHBDL1O75783 438 aa9.09□□□□□ -0.95
GCN1-202ENST00000547263 ALX3O95076 343 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms