RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 CRHBPP24387 322 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 TAS2R43P59537 309 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 BDH1Q02338 343 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 ACSM1Q08AH1 577 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 CDK5R1Q15078 307 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 ZMYND11Q15326 602 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 RBM48Q5RL73 367 aaKnown RBP12.16□□□□□ -0.46
DDX54-203ENST00000546869 AVPI1Q5T686 147 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 CLEC9AQ6UXN8 241 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 MOB3CQ70IA8 216 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 UTS2BQ765I0 119 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 SPICQ8N5J4 248 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 GATAD2BQ8WXI9 593 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
DDX54-203ENST00000546869 OR51I2Q9H344 312 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 PLEKHA1Q9HB21 404 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 UFSP2Q9NUQ7 469 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 PPIAL4AQ9Y536 164 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 MED13LQ71F56 2210 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 TANC2Q9HCD6 1990 aa12.16□□□□□ -0.46
DDX54-203ENST00000546869 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 CDIPTO14735 213 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 GATBO75879 557 aaKnown RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 ALX3O95076 343 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 CYB5R3P00387 301 aaPredicted RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 IGHV2-5P01817 119 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 WNT4P56705 351 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 IRF3Q14653 427 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 DMKNQ6E0U4 476 aaPredicted RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 SCCPDHQ8NBX0 429 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 DNAAF1Q8NEP3 725 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 SMR3AQ99954 134 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 YTHDF1Q9BYJ9 559 aaKnown RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 GSX1Q9H4S2 264 aaPredicted RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 ZNF665Q9H7R5 613 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 PAK1IP1Q9NWT1 392 aaPredicted RBP12.15□□□□□ -0.46
DDX54-203ENST00000546869 DYSFO75923 2080 aa12.15□□□□□ -0.46
DDX54-203ENST00000546869 PQLC2LA1A4F0 135 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 B4DSR2 109 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
DDX54-203ENST00000546869 MYL12BO14950 172 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 NDUFA2O43678 99 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 PLPP2O43688 288 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 LALBAP00709 142 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 ACAA1P09110 424 aaPredicted RBP12.14□□□□□ -0.47
DDX54-203ENST00000546869 IL2RGP31785 369 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 GPM6AP51674 278 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 FUT6P51993 359 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 UBE2V2Q15819 145 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 KCNJ8Q15842 424 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 ZNF404Q494X3 552 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 CEP78Q5JTW2 689 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 PLCXD3Q63HM9 321 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 XAF1Q6GPH4 301 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 PRSS48Q7RTY5 328 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 ZNF573Q86YE8 665 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 FGGYQ96C11 551 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 MSI2Q96DH6 328 aaKnown RBP12.14□□□□□ -0.47
DDX54-203ENST00000546869 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 PATZ1Q9HBE1 687 aaKnown RBP12.14□□□□□ -0.47
DDX54-203ENST00000546869 TMEM160Q9NX00 188 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 ZNF281Q9Y2X9 895 aa12.14□□□□□ -0.47
DDX54-203ENST00000546869 SIRT4Q9Y6E7 314 aaPredicted RBP12.14□□□□□ -0.47
DDX54-203ENST00000546869 CR1P17927 2039 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 A6NLC8 198 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 SRRM5B3KS81 715 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 LGALS8O00214 317 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 RGS10O43665 173 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 LMX1BO60663 402 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 MRPS14O60783 128 aaKnown RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 MT-ND2P03891 347 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 MUC1P15941 1255 aaPredicted RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 MPZP25189 248 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
DDX54-203ENST00000546869 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 KCTD8Q6ZWB6 473 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 SERPINA12Q8IW75 414 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 OR13C3Q8NGS6 347 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 OR10AC1Q8NH08 325 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 ZNF671Q8TAW3 534 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
DDX54-203ENST00000546869 AQP3Q92482 292 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms